New model in OGS2.0 | DPOGS203072  |
---|---|
Genomic Position | scaffold47:- 34508-36197 |
See gene structure | |
CDS Length | 1164 |
Paired RNAseq reads   | 219 |
Single RNAseq reads   | 695 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007767 (1e-120) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | glycerophosphoryl diester phosphodiesterase [Bombyx mori] (1e-136) |
Best NR hit (blastx)   | glycerophosphoryl diester phosphodiesterase [Bombyx mori] (5e-123) |
GeneOntology terms    | GO:0006071 glycerol metabolic process GO:0006629 lipid metabolic process GO:0008081 phosphoric diester hydrolase activity GO:0008889 glycerophosphodiester phosphodiesterase activity GO:0012505 endomembrane system |
InterPro families    | IPR004129 Glycerophosphoryl diester phosphodiesterase IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain |
Orthology group | MCL23550 |
Nucleotide sequence:
ATGGCTATACGCTTTAAAATGACAAAAGCAAAAGTTTTGAGCCTCACTGGAGTTTTACTT
CTTCTGACGGTGGGGTGCCTCACAATTGTGTTGGCTGCACCTGCCGCTAAAACGGAAAAT
CCTCACAATAGAGAATATAATTCTTGTTCGCCTGTAGTCATCGCTCACAGGGGTGCGAGC
GGTTACATACCAGAACATACCCTGGGCTCCTACGCATTGGCCATCACTATTGGATCCGAC
TTCGTGGAACCCGATCTAGTCATAACAAAAGATGGCCATTTAATTGCGAGACACGATAAT
GAATTGGGGCTAACCACAGACGTTGGGAATCATCCCGAATTCTCTGACCGTTATCGAACA
CAGCGGGTAGATGGAAAACAGATTTCAGGATGGTTCACAGAAGATTTCACTCTCCAAGAA
ATCAAAACATTAAGAGCCATAGAACGTATCCCCGACATAAGACCCGGAAACGCAAGATTG
GATGGTATATTTGAAGTGCCAACATTCCAAGAAATAATAGACTTGGTCAAAAGCATGCAA
TCTAGTCAGAGAAGAAACATCGGTATTTATCCTGAAATAAAACACAGTACTCATTTCGAA
CAGTTGGGACTGAAAATGGAAGAATTAGTTGTAAATACTTTTCATGAAAATGGTTACAGA
GGCTTCGAAGCACCTGTATACATACAGTCTTTTGAAGTTAGCAATTTAAAAGAACTGAGG
ACATTGACAGATTTGAAATTACTACAACTATATGAAAGTGATGTCACTCTTCGACCAGCA
GATCAAATCGCTCGTAATACTAACCTCACGTACGCGAAAATGTTGACTCCCGAAGGATTA
AAGGAAGTTTCCAAATACGCTAATGCTGTAGGGCCAGACAAAAGCCTTATAATCCCTCGA
AACAATGATAATACTTTAGGTGAGCCCACTAGTTTCGTTGCCGATGCTCATAATGCAGGT
TTACAAGTGCATCCATATACTTTCCGAGCTGAGAACGATTTCTTACCCAAAGAATTTAAA
TCTGATGATTCTGATTCCTCTCGCAACGCTAGAGGAAATTTGAAAGGTGAAATTGAAGCG
TTCATCGCAGCTGGTATTGATGGACTATTTACGGATAATCCAGACGTACCGGTTATCCTA
CGTGGAAAGTGTTCCAACAATTAA
Protein sequence:
MAIRFKMTKAKVLSLTGVLLLLTVGCLTIVLAAPAAKTENPHNREYNSCSPVVIAHRGAS
GYIPEHTLGSYALAITIGSDFVEPDLVITKDGHLIARHDNELGLTTDVGNHPEFSDRYRT
QRVDGKQISGWFTEDFTLQEIKTLRAIERIPDIRPGNARLDGIFEVPTFQEIIDLVKSMQ
SSQRRNIGIYPEIKHSTHFEQLGLKMEELVVNTFHENGYRGFEAPVYIQSFEVSNLKELR
TLTDLKLLQLYESDVTLRPADQIARNTNLTYAKMLTPEGLKEVSKYANAVGPDKSLIIPR
NNDNTLGEPTSFVADAHNAGLQVHPYTFRAENDFLPKEFKSDDSDSSRNARGNLKGEIEA
FIAAGIDGLFTDNPDVPVILRGKCSNN