| New model in OGS2.0 | DPOGS203076 |
|---|---|
| Genomic Position | scaffold47:+ 882-2958 |
| See gene structure | |
| CDS Length | 1128 |
| Paired RNAseq reads | 213 |
| Single RNAseq reads | 655 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001852 (6e-126) |
| Best Drosophila hit | XNP, isoform B (2e-66) |
| Best Human hit | transcriptional regulator ATRX isoform 2 (6e-59) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC009794 [Tribolium castaneum] (6e-72) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009794 [Tribolium castaneum] (3e-68) |
| GeneOntology terms | GO:0003678 DNA helicase activity GO:0005634 nucleus GO:0016251 general RNA polymerase II transcription factor activity GO:0006350 transcription GO:0004386 helicase activity GO:0003677 DNA binding GO:0005524 ATP binding GO:0007411 axon guidance GO:0008347 glial cell migration GO:0007399 nervous system development GO:0006917 induction of apoptosis GO:0046328 regulation of JNK cascade GO:0051276 chromosome organization GO:0005700 polytene chromosome GO:0000775 chromosome, centromeric region |
| InterPro families | IPR000330 SNF2-related IPR014001 DEAD-like helicase |
| Orthology group | ND |
Nucleotide sequence:
ATGGCCCGCGCCAGGCACACCAACTGTCTCTGCCCCACTGAGAAGTTCCCACCCCCCTCA
GACATACGTGAACTGAGACCCGCGGCCCTGCAGCTTCCACAAGCAGTGTTATCGCCCACT
TTGGGAAGGGCTGGCCTGGATGAACGAAAAGTTCGACGACATAGGAAACGAACCTGCGAC
TTTGGAAAGATCATCCCACTCGCTGTATTTGAATTGTCAAAACTGAAGAAGACATACGAA
CGAGCATATCAGTTGGAGGACTGGTATAATGGAGGTGGGATTTTTATCATTGGATACGAA
CTATTTAGGAGTCTGAGTACTTTGGACCCTGTTCTTGACGGTGTGAGGCCCAAAGTCCTG
AACAAAATCCGCACAGCGCTGTTGGATCCTGGTCCGGATATCATAGTTTGTGATGAAGGT
CATTTGTTGAAGAACGACTGCTCTATACTGGCGGTAGCCATGAGTAGAGTGGTCACTAAG
AGACGTATCGTACTCACGGGCACTCCCATGCAAAATAATCTCAGGGAATATTACTGCATG
GTGAATTTCGTTAAACCGAATTTATTAGGATCTTACTCGGAATACTCCAACAGATTCGAG
AATCCGATTATGAACGGGCAGCACAGGGACTCGAGAGAGGAAGATATAAAATTGATGAAG
GCTCGTACACATATTCTTCACAAAGTGTTAGAAGGGTGTCTCCAGCGTCAGGAGGCGTCC
GTGCTGTATCCGTACTTGCCAAAGAAATACGAGTACACTGTGTTCATATCACTGACGAAG
TGCCAGTGGGAACTGTACAAACATTACCTGACGCATTACGCGAAGGACACCAAGCAGAGT
GTGCTGAGAGACTTCCACGTGCTACAGAAGGTGTGGACCCATCCTCAAGTGCTACATAAC
TTCTTGACGAAGACGCGCGCTGACGAAAAGGAACCCAAAGTCAAAGTGGAGAAGATAGAG
AAGTTGGACGATGATCTCGAAGAGTCTCCCGAGCACGTGGCCGCGGCGGCCGAGTGGTGG
GCGAGCACACAACACAGACACGAACTGAACGAACTGGATACCAAAAAATATAAAGTTAAA
TACAAACAATTATATATACGTATATATATATATAAGAGCTGTAGGTAA
Protein sequence:
MARARHTNCLCPTEKFPPPSDIRELRPAALQLPQAVLSPTLGRAGLDERKVRRHRKRTCD
FGKIIPLAVFELSKLKKTYERAYQLEDWYNGGGIFIIGYELFRSLSTLDPVLDGVRPKVL
NKIRTALLDPGPDIIVCDEGHLLKNDCSILAVAMSRVVTKRRIVLTGTPMQNNLREYYCM
VNFVKPNLLGSYSEYSNRFENPIMNGQHRDSREEDIKLMKARTHILHKVLEGCLQRQEAS
VLYPYLPKKYEYTVFISLTKCQWELYKHYLTHYAKDTKQSVLRDFHVLQKVWTHPQVLHN
FLTKTRADEKEPKVKVEKIEKLDDDLEESPEHVAAAAEWWASTQHRHELNELDTKKYKVK
YKQLYIRIYIYKSCR