| New model in OGS2.0 | DPOGS202830 |
|---|---|
| Genomic Position | scaffold4446:+ 1594-3843 |
| See gene structure | |
| CDS Length | 1095 |
| Paired RNAseq reads | 1287 |
| Single RNAseq reads | 4567 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | PDGF- and VEGF-related factor 3, isoform A (3e-26) |
| Best Human hit | ND |
| Best NR hit (blastp) | VEGF27Ca [Drosophila melanogaster] (2e-26) |
| Best NR hit (blastx) | VEGF27Ca [Drosophila melanogaster] (2e-26) |
| GeneOntology terms | GO:0048010 vascular endothelial growth factor receptor signaling pathway GO:0035099 hemocyte migration GO:0005172 vascular endothelial growth factor receptor binding GO:0016020 membrane GO:0008083 growth factor activity GO:0007435 salivary gland morphogenesis |
| InterPro families | IPR000072 Platelet-derived growth factor (PDGF) |
| Orthology group | MCL16391 |
Nucleotide sequence:
ATGAAAAGAAACAGACGTTCGAATCTATTCCTGGAACATTCTTGTAAAGTGAGCGCATTG
GCTATACAAGGAATTGTTTCAGTACTCAGCCGGGAAAGGCATCCCGTCGACTGGCATGAT
CTAGATCAAGAGGGTGATGGTGATTACGCGAACGACGTTGGTGAGGAGTGGGATCCCTTG
GAGGACGACACCAGCTCCACGACCAGACCCTTGCTGGGAGTAACTCCATCAGCCATCACT
AGGCTAGATAGCTACAGACACACTATCGTCTCCGCAGTGGACCCAGTAGCGGCTACCAAT
GAGAGGCCGAGGATACTGGACGACTCGCACGCCACGGCCGAAGAACGTGTGGCAACTAGA
AAAGCTGTTATCGCCAATATCGGGAACGTTGTACGAGCTGGTAAATGTCTCACGCCACAA
CCACGTTGGCTCTCAGTCAGGAAATTGGCCCCGGCCGCTGATACCGTGTACATGCCTCCC
TGCGTGCAATTACATCGCTGTGCACCCGACTCCGGTTGCTGTTATGACGAATCTGAAGTC
TGCGCTCCTGTAGACGGCAAATATGTAGCGCTGCCATTCTTTCTAAATAAACCAGACAAG
AATCTGACAGCGGCCCGGATACTGTTCTTTAACCACACGAGATGCGCTTGCGTTTCGCGT
GACACTTTACAGAGCACTGCCCGCACCAGAATAGAACATAAAGAAGAGAGGAAAGAGACT
CGAGACAGGGAAAGACAAAACGACTGGCAAGCTCCTACTGAAGAACCTGTAGCGGAGAAG
GACGAAGCAATAACATCACCGCCTCTGCTGCGCAGATGTACATGCCCAACGCTCTTTAGG
AAGCGGATCAAGGACGACGTGTGCAGCTGTGTGTGCGACTGGCCCGACGTTAACAAAAAA
CGCGACTGTCTCTCGCTCGCTAAGGGGAGGGAACACTTCGGACTAAGAGACAGATTCTGT
GTGAAACAGGGCGACTGCACCACACCGAACTGCGAATACGGAGCGTATGATAGAAGCGCG
GGGAGATGTCCGTACAGAAGATTTAAGAGAAGATTCCATTCAAGGAGATACCAATCAGAT
AAACCGGCCGTTTGA
Protein sequence:
MKRNRRSNLFLEHSCKVSALAIQGIVSVLSRERHPVDWHDLDQEGDGDYANDVGEEWDPL
EDDTSSTTRPLLGVTPSAITRLDSYRHTIVSAVDPVAATNERPRILDDSHATAEERVATR
KAVIANIGNVVRAGKCLTPQPRWLSVRKLAPAADTVYMPPCVQLHRCAPDSGCCYDESEV
CAPVDGKYVALPFFLNKPDKNLTAARILFFNHTRCACVSRDTLQSTARTRIEHKEERKET
RDRERQNDWQAPTEEPVAEKDEAITSPPLLRRCTCPTLFRKRIKDDVCSCVCDWPDVNKK
RDCLSLAKGREHFGLRDRFCVKQGDCTTPNCEYGAYDRSAGRCPYRRFKRRFHSRRYQSD
KPAV