| New model in OGS2.0 | DPOGS211201 |
|---|---|
| Genomic Position | scaffold167:- 119614-122402 |
| See gene structure | |
| CDS Length | 1170 |
| Paired RNAseq reads | 30923 |
| Single RNAseq reads | 92612 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003186 (0.0) |
| Best Drosophila hit | eukaryotic initiation factor 4a, isoform D (5e-167) |
| Best Human hit | eukaryotic initiation factor 4A-I (5e-160) |
| Best NR hit (blastp) | eukaryotic initiation factor 4A [Plutella xylostella] (0.0) |
| Best NR hit (blastx) | eukaryotic initiation factor 4A [Plutella xylostella] (0.0) |
| GeneOntology terms | GO:0003724 RNA helicase activity GO:0003743 translation initiation factor activity GO:0006413 translational initiation GO:0016281 eukaryotic translation initiation factor 4F complex GO:0005829 cytosol GO:0017116 single-stranded DNA-dependent ATP-dependent DNA helicase activity GO:0006268 DNA unwinding involved in replication GO:0000339 RNA cap binding GO:0003729 mRNA binding GO:0002168 instar larval development GO:0007446 imaginal disc growth GO:0009950 dorsal/ventral axis specification GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity GO:0005634 nucleus GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome GO:0000022 mitotic spindle elongation GO:0007052 mitotic spindle organization GO:0005875 microtubule associated complex GO:0006974 response to DNA damage stimulus GO:0048477 oogenesis GO:0048132 female germ-line stem cell division GO:0030718 germ-line stem cell maintenance |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014014 RNA helicase, DEAD-box type, Q motif IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site |
| Orthology group | MCL11587 |
Nucleotide sequence:
ATGGAGCCCGGCGGCGCCCTCGACACAAACTGGCATGAAGTCGTGGAAAGCTTTGATGAC
ATGAAGTTGAAAGAGGAATTGTTGCGAGGAATTTACGCTTACGGTTTTGAGAAACCTTCA
GCCATCCAACAACGCGCAATCATGCCCTGCATCAAGGGTCGTGACGTTATAGCTCAAGCC
CAGTCTGGTACTGGCAAAACTGCTACTTTCTCAATTTCGATTCTACAACATATTGATACT
AGTGTTCGCGAGTGTCAAGCTTTGATTTTAGCTCCGACTCGGGAATTAGCTCAACAAATT
CAGAAGGTTGTGATTGCCCTGGGTGATCATCTGAATGCTAAGTGCCATGCTTGTATCGGT
GGTACTAATGTACGTGAGGATATACGTCAGCTGGAGAGTGGTGTCCATGTTGTTGTGGGC
ACCCCTGGTCGTGTATATGATATGATCACTCGTCGGGCACTCCGCGCTAACACGATTAAG
CTGTTTGTGCTCGACGAGGCTGATGAAATGTTGTCAAGAGGATTTAAAGATCAAATCCAT
GATGTCTTCAAGATGTTGTCATCTGATGTTCAAGTCATTTTGCTATCTGCTACTATGCCT
GATGATGTGTTAGAGGTCTCCCGCTGCTTTATGAGAGATCCTGTTCGTATTCTTGTGCAG
AAGGAAGAGCTCACACTGGAAGGTATTAAACAGTTCTTCATCTCAATTGATATTGAAGAT
TGGAAATTGGACACACTCTGTGACTTGTATGATACTCTTTCTATCGCCCAAGCCGTCATC
TTCTGTAACACACGTCGCAAGGTCGACTGGCTGACCGAGTCCATGCATCAGCGTGATTTC
ACGGTATCTGCCATGCACGGTGACATGGACCAGCGCGAGCGTGAAGTGATCATGCGTCAG
TTCCGCACAGGCTCGTCCCGTGTACTGATCACAACCGATCTGTTGGCGCGAGGCATCGAC
GTGCAGCAAGTGTCCTGCGTCATCAACTACGATCTACCCACCAACCGAGAGAATTACATC
CATCGTATCGGACGAGGTGGTCGTTTCGGTCGTAAGGGGATCGCCATCAACTTTGTGACT
GAAGCTGACAAGAGGGCGCTGAAGGATATCGAGGAGTTTTACCATACTACTATTACGGAA
ATGCCCAACGATGTGGCTAACCTCATCTGA
Protein sequence:
MEPGGALDTNWHEVVESFDDMKLKEELLRGIYAYGFEKPSAIQQRAIMPCIKGRDVIAQA
QSGTGKTATFSISILQHIDTSVRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIG
GTNVREDIRQLESGVHVVVGTPGRVYDMITRRALRANTIKLFVLDEADEMLSRGFKDQIH
DVFKMLSSDVQVILLSATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFFISIDIED
WKLDTLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHQRDFTVSAMHGDMDQREREVIMRQ
FRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYIHRIGRGGRFGRKGIAINFVT
EADKRALKDIEEFYHTTITEMPNDVANLI