New model in OGS2.0 | DPOGS211101  |
---|---|
Genomic Position | scaffold167:+ 19783-27282 |
See gene structure | |
CDS Length | 2211 |
Paired RNAseq reads   | 57 |
Single RNAseq reads   | 209 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006723 (7e-06) |
Best Drosophila hit   | junctophilin, isoform B (3e-09) |
Best Human hit | radial spoke head 10 homolog B (3e-30) |
Best NR hit (blastp)   | conserved hypothetical protein [Pediculus humanus corporis] (5e-47) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC013368 [Tribolium castaneum] (4e-50) |
GeneOntology terms    | GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
InterPro families   | IPR003409 MORN motif |
Orthology group | MCL18206 |
Nucleotide sequence:
ATGTTCGCTAAGGACCTTGTGCTGCTATCGATACTTTGTACTCTTAGTTCGTGCTTTGGA
TCCAACGAAACTAGTGAAGAATTCTTTCACGGCGATTTACCCATTCAACCCATTGACTTG
GATTCGACGTCAGAAATCAATCAAGACACACCGGCGCCGCCGTGGAGGTTTTGGAGAACG
TGGAAATTTTGGCAATGGGGTCATGTTTTAAAAGAAAGATTGAGGCGCTCTGAAACGGCG
GAGAACGTGCAGGGCACACTTCATGATTATGATGTAGGACCTGATCCTAAGAAACAAATG
TATTCGATATGTTGGGCTGATGGTGTACCAATAACTGTCAAGCCGGCCTTACTTCTCTTG
ACATATAGTCAATACCAGAGACTTTTAGGGCAGCTTGCCTTATCCTGGGTACAGAGCGAT
GTAATACAGACCTGTTGGTGGTCATCGCCAGACGAACGTGCCATTATCAAGTTCCGGAAT
GGTTGCACATACGAAGGAAATATTTCAATGAAGTGTATGCATGGTGAGGGTCGCTATCAG
TGGGCAGATGGAACTGTGTACCTAGGTCAGTTTAAGAATAACGAAATAACTGGGAAGGGC
ACTATTTATTGGAAAGACGACACATGGTACCAGGGCGATTTCTATGGCAACCTTCGCCAC
GGAAATGGACTATACGTTGATTCTAGACGTCAGCGCTCATATGCCGGAAAATGGCATTAT
GGCACAAAAGACGGACAAGGAGTTATTTATTATGATGGCAGTTTTAAAAATTCCTACGAC
GGAGAATGGGCTTTAAACGAACGTCATGGATATGGTTCCCGTGAATATTGCAAGGTTAGC
GGTTATAAAGGAGAATGGAACAAGTTTATCAGGGAAGGAAAGGGTATGATGATATGGCCA
AATCACGACTTCTACAGAGGTGAATGGAAAAATGGTGTCATGTCTGGTTACGGATTCTAT
ATATGGGAAGCTTATTACAATAATTCCATGTCTTTACCCTCACTGTGTGCATATCGCGGG
TTTTGGGAAAAGGGAAAACGAAATGGTTATGGTATATTAAATTTAGGTTTGGCACTGGGC
TCTTATTACAAAGGGGAATTCAAAAATAACAAAAAGCACGGTGTTGGAAAATTTGTTACC
AATAACGGGCAGATATTACAGCATAAAAAATTATTTATTGATGATAACATGGGTTCATTA
AATCGAGATGATGATGAGAGTGATGGCGATGATAAGTGTGGACGCTTGGAAGAACCTTAT
TTGTTTGATATTTGTAACGATTCCGTTGGTCTGCTTTATCATGTTGAACGGTTGACCTTA
GTTGATATCGATAGGCTTTTTCACGAGAACCCCGAATGGTTGTCTCGTAAACCTCACAAC
CCTTTTGAAAAGATTTACTTTTGGCAATTCCAACACAGCCTAATTTCAGTAGCTAGTAAA
TTGTATGCCAAAAGACATTTACCAGGTAAGAAACCTGATACTATGCTGGCAAGTGCATTT
AGGCTTTTCATGGAAAAGGATATTCTACCTGGCGCTGGTCGAAAAAGAGGGAGACTTGTA
GGGGGATGTGGATCCTTTGTTCCTTTGAAAGACTTGTATCATTTATATCAAACTTTAGAT
GAACCATGCACTGTAAGGACTTTTCTGTGTGCCGCTCGACATGCACCGCACTACGCAGAA
CAACCAAGTCTTGTTGATTATGACTGCTCCAGTCTTGGTAGAAATGCGTATATTTTTGGA
ACTGATGATCAAAACATAGGAAAGACTGAAACAAGACACATGCTTGAAGAGATATTTACT
AGAACTGATCCCATTTACGCTTTCAAACCACTCGTCAATTTTACTTCATATCCTTGTACA
GACACACCAGGACGAAATAAATTAATGAAAAGTGCGAATTTGGCTCAACTACCACCAGAT
TATGGTGTAATGGACTACCTTAGTACCCAGCAAAACGATTATAGAAATCCGTTCGCAACG
GTTGCAAAACCCTTGACAATGCCCTCGACACCTTGGCTTCTAAATCGCGTGATCCGATCC
GATCTGACGCACAACCACGGCACAGCACCTCCCAAAGGAGACTATCAATGCTTAGACACA
CACACACCCATCGGTCACATACGCCACATGAGGAAATTCCGCTACCAATCCTTCAACCCG
GCCACATGCCTTCAAGACTTCCCAGACGTAGAATTACCATCACACCCATAA
Protein sequence:
MFAKDLVLLSILCTLSSCFGSNETSEEFFHGDLPIQPIDLDSTSEINQDTPAPPWRFWRT
WKFWQWGHVLKERLRRSETAENVQGTLHDYDVGPDPKKQMYSICWADGVPITVKPALLLL
TYSQYQRLLGQLALSWVQSDVIQTCWWSSPDERAIIKFRNGCTYEGNISMKCMHGEGRYQ
WADGTVYLGQFKNNEITGKGTIYWKDDTWYQGDFYGNLRHGNGLYVDSRRQRSYAGKWHY
GTKDGQGVIYYDGSFKNSYDGEWALNERHGYGSREYCKVSGYKGEWNKFIREGKGMMIWP
NHDFYRGEWKNGVMSGYGFYIWEAYYNNSMSLPSLCAYRGFWEKGKRNGYGILNLGLALG
SYYKGEFKNNKKHGVGKFVTNNGQILQHKKLFIDDNMGSLNRDDDESDGDDKCGRLEEPY
LFDICNDSVGLLYHVERLTLVDIDRLFHENPEWLSRKPHNPFEKIYFWQFQHSLISVASK
LYAKRHLPGKKPDTMLASAFRLFMEKDILPGAGRKRGRLVGGCGSFVPLKDLYHLYQTLD
EPCTVRTFLCAARHAPHYAEQPSLVDYDCSSLGRNAYIFGTDDQNIGKTETRHMLEEIFT
RTDPIYAFKPLVNFTSYPCTDTPGRNKLMKSANLAQLPPDYGVMDYLSTQQNDYRNPFAT
VAKPLTMPSTPWLLNRVIRSDLTHNHGTAPPKGDYQCLDTHTPIGHIRHMRKFRYQSFNP
ATCLQDFPDVELPSHP