| New model in OGS2.0 | DPOGS200714 |
|---|---|
| Genomic Position | scaffold557:+ 54574-65074 |
| See gene structure | |
| CDS Length | 4320 |
| Paired RNAseq reads | 1778 |
| Single RNAseq reads | 4410 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001048 (0.0) |
| Best Drosophila hit | arrow (0.0) |
| Best Human hit | low-density lipoprotein receptor-related protein 6 precursor (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG5912-PA [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG5912-PA [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0016055 Wnt receptor signaling pathway GO:0005041 low-density lipoprotein receptor activity GO:0001745 compound eye morphogenesis GO:0005769 early endosome GO:0042813 Wnt receptor activity GO:0005770 late endosome GO:0005886 plasma membrane GO:0017147 Wnt-protein binding GO:0006622 protein targeting to lysosome GO:0060070 canonical Wnt receptor signaling pathway GO:0048076 regulation of compound eye pigmentation GO:0007399 nervous system development |
| InterPro families | IPR000033 LDLR class B repeat IPR006210 Epidermal growth factor-like IPR001881 EGF-like calcium-binding IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site IPR011042 Six-bladed beta-propeller, TolB-like |
| Orthology group | MCL10054 |
Nucleotide sequence:
ATGTTCCTACAGTTAAAAGGTAAATTTATATCTTTAGATATAGACATTTCAATCAGAGAT
AATAATAAACACAAGCGTTTCTCACCAGGTTACTATTCAACCACAAATAATCCTGTGTTG
TTATATTCTACTGCATCTGACATTCGAGTTGCAAACACTTCAAAATTGGGGAAAATAAAC
GTTATAATAAAAGGCCTAGAGCAAGGCTCTGCTGTAGACTTTCTCCATAAAAAAAATACA
ATATGCTGGTCAGATCAGACTGCGGAATTGATACAATGTATGGAATACAACGACACCCAT
TCAGGAGAGAAGATAAGAATAGTTTCAGAAGGTATAATTACTCCTACTGGTATTGCATTA
GATTGGTACACTAATAAAATGTACTGGACGGACGGTGAAACTAATAAAATTGAAGTGATT
TGTATTGAAAATAAATATAGGAAAGTACTATTTTGGTCAGATGTCGACCTTGCAAGAGCT
ATTGCTCTCGTTCCAACAGAAGGGCTTATGTTCTGGACCGATTGGGGAGAAATACCTAAA
ATAGAAAGGGCTGGTATGAACGGTGATCCGGCCACAAGGAAAGTTATAGTGAAGGATAAT
ATATTTTGGCCGAATGGAATCACAGTGGATTATAACAACAATTTAATATACTGGGTTGAC
ACTAAGTTACAATTTGTTGATGTGATGGGTTTCAATGGTGAGAATCGGAAACGGGTCGTT
AAAGATGGCTTGAAGCATCCTTATGCTTTGGCTTATTTTGATAATAAACTTTATTGGACC
GATTGGAAGAAATGGTCCATATATACGTATGACATAGCTGCAAATAGTTCTCTGAAAGAA
ATTATAAAATCCGACCATGTGCCGGTAGACATCAAGGTGTACGATGAAAGTCGGCAAGTT
ATACCCAATGGAGAGTACCCTTGTAAAAACAATGAGAAATGTTCACATCTGTGCCTTCTA
GCTCCTAATTCGCCTGGCTATGTGTGCAGCTGTCCAACCGGCGTAAAGTTAAGGGAAGGC
AGCAACACAACCTGCTACAATGGACCGCAGTCATTGCTGTTGGTGGCTCAGAGATCGATC
ATATCAAAAATATCCCTCGACTCACCGGACTACACGCCTTACTCGTTACCATTGAAAGAT
CTTAAGAGAGCTCTTACAGTTGATTTTGATCCCAAAACTGAATATATATATTGGGCTGAC
AGCATGTCCAAGACAATATCTCGAGCTCGTCTGGATGGCAGCGACCAATCAATAGTGATC
CATTGTAGCGGTGTACCGGACAGTATAGCCATAGATCCGCTAGCTAGGAATATTTACTGG
ACTGATCCTATATCTGACACTATAACTGTGGCCAGGCTGGATGGACAAGCTAGAAAAGTT
ATAATTCACGACGAGCTTTACGATCCTCGCGCGATCGCCCTACATCCGGTGGCCGGGTGG
ATGTTCTGGTCCGATTGGAACGAGAAGAAACCTAAAATAGAACGAGCCAACCTCGACGGC
ACAGGACGGGTGTTGCTAGTCTCCGAAAAACTGATTTGGCCAAATGGCATCGCTCTGGAT
ACGGAAAAAAATAAACTGTACTGGGGTGACGCGAGAACACATAAAATAGAGGTCTGTAAT
ATGGACGGGTCCGGAAGGCGTGAGCTTCATGGGAGTGACATTCTTCATATATTTGGACTC
ACCCTTCTGGGTGATAATCTGTACTGGACTGATATGCAGCGACGCACATTGGATAGGATC
AACAAGGAAACTGGGTCGTCACGTCAGTCGGTGGTGGAGCAAATGGCGAACATGATGGGT
GTGCGTGCCGTCCGTTTGGGTCCGCTGGCCAGCCGGAACCCATGCTCGGCTGAACACGTC
TGCTCACACCTGTGCTTCAACCGACCCGACACACACGTGTGCGCCTGCCCTATCGGTCTG
GAGCTCGGAAGCGACAGGAAGACTTGCATAGAACCGGAAGCCTTCCTCTTGTACAGCAGG
AAGAACATCATCGGACTTATAAGTATCGACAATGAGAACAACGACGCGGTGCTGCCTATA
AAGGAGCTGAAGGAAGTCAGTGCCCTAGCAGTAGACGTGTCCGGTTCCAAGTTATACTGG
TCGGACAGCAAAACAAAAACAATAAATCGATGTAATATAAACGGATCCAATATGGAGAAG
ATACTAGAGTTCATGGGTCTTGTTGAAGGTGTCGCGATAGACTGGTCGGCTCAGAACATC
TACTGGACGGACACGGCGGCGCATCGCATCGAAGTGGCCAGACTAGACGGGTCCAGCAGA
CGGGCGATCATGTGGCAGGGGCTGAAGAAACCTAAGAGCATCGCACTCGATCCGCGGAAG
GGCTACATGTACTGGTCGGAGCTGGGATCCAAGACTATCAAACGGGCCACAATGGACGGG
TCTTCCCCCATAGTTCTATTCGAGCAGGTTGTTAAAGTCCACGCGCTGGCCATAGACTTC
GAGAAGAGAGCCATCTACTGGGCGGCACTGGACTCTATGGTCATTGAATACGCATTCCTG
AACGGAACCGGGAGGAAGGTGCTAGTCGATAACATACCCATGCCGTACGCGCTGGCTCTG
TACAACGATCGGGTGTTTTGGGGAGACTGGAATACAGGTCTCGTGGAGGTCGCGAGGAAA
TCGGACGGATCAAGTCGTAGGACCATTCATACACAGTTGGATTATATATCAGATTTGAAG
GTTTACCACAGGGGCAGGGACAACCTGTCCAACCAATGCGGGGTGGACAACGGGGGCTGC
TCGCATTTATGCTTACCTTTGACGAACAACGACTACAGATGCGCTTGTCCGACGCATTAC
AGGCTCAACAGAGACAATCTCACGTGTTCCGAGCCTGAAGAGTTCTTGTTGTACGCTCAG
AAGAACGCCGTGGGTCGGCTACTAGCTGCCAACAGCGAGTGTAGTGACGCCTTCATCCCT
CTGACGGGGCTCCGGAACGTGAAAGCGATCGAGTACGACCCGATCAGCAGACATCTCTAT
TGGATGGACGAAGAAAATCACTCCATACGAAGAGTTCCCATATCTTATTCTGCGACATCA
GCAGTCACGGACTCTACAAACGTCGTGTCCGATCTATCGAGACCCTTCCACATGGCGTTG
GACGTGCTAGGAAGGACTCTGTACTGGACATGTCTCAACACAGACTCCATCAACGCCACC
TCCATAGAAAACAACTCGTCATCCGGCGTCATAATACGAGGAGACAATATGATGCCCAGA
TATTTAGCGTTCCATCAAACGAAAAGGTTGCTGTTCTGGAGCGACGCTGGTCTGGGCGGT
ATATTTCGGTCGTTGGTGGACGGGTCGGAGCGCGCACAGTTGGTTCGTGTGGACAACGTG
ACCGCCCTCGCTCTGGACATGGGCGGTGCATCCGCCCTGTACTGGGCTGTGGGAAGACAG
ATACACGCCGTGGACATTGATGGCTCCAACAGGGACGGGGTCTGCGGCTGCGGCCTGAGC
TGCTCCGCCCGGAGACACTGTGACCCTGATCACTTCCTGTGCGGTCGAGACAACGGACCC
ACCACTAATAGCGTACAGTGTATACCCATGGAGTGGAAGTGTGACGGTCAACGCGACTGT
CTCGACGGGTCGGATGAATCTCAGTGTGACAGCTGTGCGGGGCTCCACTGCGCGGACGGG
TCCTGCGCCCCCGCACTTGGCGGCTGTCTCACGGGCGCGTACTGCACACACGCACTACCA
GACGCCTTCCGTTGTGACGACCGTCTTTGTCTGCCGGCCGGTCTACTGTGCGACGGCCGC
TCTCACTGTGAGGACGAATCAGACGAAGCCCCCGCCGCGTGTGGATACGTTCACAAAGAT
CAGATGGTGTCGGTGGGTGCGAGTGGTCAGTCGCACGCGTTAGTAGTGTGCGGATCGGTG
GTAGGGGCGGCGGTGGTGGTGGCCGCCCTGTGGGCGGGCGTCAGGCGGTACTCCAGGGCG
GGGCGACACCAGCCTCACCAGAGAACACTCGCACTCAACAAGCCAGCCACCCGACCCAGG
ACAGATGCGCCGTCATCCGAATTGAGCGCGATGGGCACTGCTTCGGGATGCGGATCCGGC
TCGGGCTCGGGCTCGGGCTCGGGCTGGGGCTCGGACAGTCTTTGCGGACGATACCCGCGA
CCTACCGCCAACCCTCCGCCCAGTCCGGCCACGGCCTCAGGAGGGAGACGACGCGCCTAC
AGGAACTATAGGGCTTCGAATAGGCCTCCGCCACCAACACCGGCCTCCACTGACGCGAAC
GAATCAGAGAACGAACACGCGAGGGCGCCACCACCCTCGCCGGCGCCCTTGCTTTACTAG
Protein sequence:
MFLQLKGKFISLDIDISIRDNNKHKRFSPGYYSTTNNPVLLYSTASDIRVANTSKLGKIN
VIIKGLEQGSAVDFLHKKNTICWSDQTAELIQCMEYNDTHSGEKIRIVSEGIITPTGIAL
DWYTNKMYWTDGETNKIEVICIENKYRKVLFWSDVDLARAIALVPTEGLMFWTDWGEIPK
IERAGMNGDPATRKVIVKDNIFWPNGITVDYNNNLIYWVDTKLQFVDVMGFNGENRKRVV
KDGLKHPYALAYFDNKLYWTDWKKWSIYTYDIAANSSLKEIIKSDHVPVDIKVYDESRQV
IPNGEYPCKNNEKCSHLCLLAPNSPGYVCSCPTGVKLREGSNTTCYNGPQSLLLVAQRSI
ISKISLDSPDYTPYSLPLKDLKRALTVDFDPKTEYIYWADSMSKTISRARLDGSDQSIVI
HCSGVPDSIAIDPLARNIYWTDPISDTITVARLDGQARKVIIHDELYDPRAIALHPVAGW
MFWSDWNEKKPKIERANLDGTGRVLLVSEKLIWPNGIALDTEKNKLYWGDARTHKIEVCN
MDGSGRRELHGSDILHIFGLTLLGDNLYWTDMQRRTLDRINKETGSSRQSVVEQMANMMG
VRAVRLGPLASRNPCSAEHVCSHLCFNRPDTHVCACPIGLELGSDRKTCIEPEAFLLYSR
KNIIGLISIDNENNDAVLPIKELKEVSALAVDVSGSKLYWSDSKTKTINRCNINGSNMEK
ILEFMGLVEGVAIDWSAQNIYWTDTAAHRIEVARLDGSSRRAIMWQGLKKPKSIALDPRK
GYMYWSELGSKTIKRATMDGSSPIVLFEQVVKVHALAIDFEKRAIYWAALDSMVIEYAFL
NGTGRKVLVDNIPMPYALALYNDRVFWGDWNTGLVEVARKSDGSSRRTIHTQLDYISDLK
VYHRGRDNLSNQCGVDNGGCSHLCLPLTNNDYRCACPTHYRLNRDNLTCSEPEEFLLYAQ
KNAVGRLLAANSECSDAFIPLTGLRNVKAIEYDPISRHLYWMDEENHSIRRVPISYSATS
AVTDSTNVVSDLSRPFHMALDVLGRTLYWTCLNTDSINATSIENNSSSGVIIRGDNMMPR
YLAFHQTKRLLFWSDAGLGGIFRSLVDGSERAQLVRVDNVTALALDMGGASALYWAVGRQ
IHAVDIDGSNRDGVCGCGLSCSARRHCDPDHFLCGRDNGPTTNSVQCIPMEWKCDGQRDC
LDGSDESQCDSCAGLHCADGSCAPALGGCLTGAYCTHALPDAFRCDDRLCLPAGLLCDGR
SHCEDESDEAPAACGYVHKDQMVSVGASGQSHALVVCGSVVGAAVVVAALWAGVRRYSRA
GRHQPHQRTLALNKPATRPRTDAPSSELSAMGTASGCGSGSGSGSGSGWGSDSLCGRYPR
PTANPPPSPATASGGRRRAYRNYRASNRPPPPTPASTDANESENEHARAPPPSPAPLLY