| New model in OGS2.0 | DPOGS208912 |
|---|---|
| Genomic Position | scaffold1856:+ 928-5924 |
| See gene structure | |
| CDS Length | 4629 |
| Paired RNAseq reads | 3521 |
| Single RNAseq reads | 8050 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002483 (7e-52) |
| Best Drosophila hit | echinus, isoform C (4e-89) |
| Best Human hit | inactive ubiquitin carboxyl-terminal hydrolase 54 (5e-72) |
| Best NR hit (blastp) | PREDICTED: similar to echinus CG2904-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011087 [Tribolium castaneum] (2e-162) |
| GeneOntology terms | GO:0046667 compound eye retinal cell programmed cell death GO:0046666 retinal cell programmed cell death GO:0006511 ubiquitin-dependent protein catabolic process GO:0004221 ubiquitin thiolesterase activity GO:0001745 compound eye morphogenesis GO:0004843 ubiquitin-specific protease activity GO:0016579 protein deubiquitination GO:0016318 ommatidial rotation |
| InterPro families | ND |
| Orthology group | MCL16321 |
Nucleotide sequence:
GAGCTGTTTGCCCAGTTACAATGGTCTGCGGAGCGCGCGCCGGCTGCGGATGGGCTTCGG
AGAGCCTTGGGCGGTGGTGGAGCTCGTTTTCAACTTGGTTGTATGGCGGACGCCAGCGAA
TGCTTCGAGCATCTTCTGTTGAGGGTGCACGCACATGTCGCGGCTGGTACTGGAGATAAG
AGAGAGGATGACGCCTGCAGAGTCCCGCACTGTGTGCCCCACAGGAAGTTCGCTATGATG
CTCGTCGAACAATCAGTCTGTGGGGCCTGTCAAGCCACCTCCGAACCGTTACCTTTCACG
CAGATGGTGCACTACGTGTCAGCGACCGCCCTCACCGCTCAAGCTGCCCTGGGAGAAGTT
GGCGATAGCTTTGGGACCCTGCTGAGAAAAGCCGGAGGAATGGGAGACGTGCGAGATTGC
CCCAACGCCTGCGGTGCAAAAATCCAGATCTGCCGTACATTAATGAACCGTCCTGAAGTG
GTGTCTATCGGTATGGTTTGGGATTCCGATCGTCCATCGGCTGAGCAGGTGTCAAGCGTA
TATGCAGCACTCGGTACTGAGCTGAGACCCACGGACGCCTTCCACGCGTGCGTCGACCGA
GCCTGGGCGGCCCGTGCCACGCATCGCCTTGTAGGACTCGTCACCTATTACGGAAAACAT
TACTCCACCTTCTTCTACCATAGCAAATTGCGGCTTTGGATATACTTTGATGACGCCGAC
GTGAAAGAAGTAGGACCAGAATGGTGCCAGGTTGTAGAAAAGTGTAGGCGAGGCAGATTT
CAACCGCTTCTGCTTCTTTACGCTGCTATTGATGGTACACCCTGTGACACACGACACGCT
CCTAAGGATGTAGTGCCATTTCCAGCACCTGAACCACGAAGGGCTGTCACTCCAGCTCCG
GAGAGACCCGCGGCCGCATACGCCAGACGAGCAGTTACACCGGGACCGGATAACGACAGC
GATTACGTAAACAGAAAGGCCGTGGAGAATATGTTTGAGGTGCAAGCCAGTCGGCGGGCA
CAATTAGGTAGAAGCTTAAGTGCGAGTTCAGCGTCAGATACGCAAGAACGGCCTCGATCT
AGACGGGATTCAGGAAACTGGAGCGGGGACAGGAACAGTGCGTCATCGACCTCGTCTAAT
AATGAGAGTCCTTACATGTTCACTCGCGGACGGGGATCTGGTAGTATACCAAGTAGTCCC
ACTCGAAAAGGAGAACTTTCGAGTGGCGGATCCTGCGACGCTGGCTACGATTCGTATTCC
TTATCATCAACTGACAGCGTTTCCTTGCAACAAGGCCTCCGCCATAACTTACAATTAGCA
CAGATACCAGAATTGACAACGCGGGGTGACTGCGAAGCTCTATGTTTGGAAGCTGACAGA
TTACTTGAAAAATCTCGTCACGTTGAAGACGCAGGGGAGTACGAAAGTGCTCTGGCGCTA
TGTGACACAGCAGCATCCAAAGCTAGGGCTGCGATGGACGCCCCCTACAATAATCCCCAC
ACAATGACGTTTGCTCGAATGAAACATAACACTTGTGTCATGCGAGCACGGAGTCTTCAG
CGACGCATGGCGGGGATGATCAGAGTAACTGAAATACCACAATCAGCGCCAGTGAGGAAC
ACTAAAGGAGGCCTGGAAAACTCCCCAACAACAATAGAAATTTATGCTACTCTGCCTAAA
AAGAAGGGATCAAAGAAATCACCTAAAGCTGTTATTGATGATGACTTGGAAACAATACCA
AGAGAACGACCGCCTCGATATAAATCACGTGAAGAAGAAAAGGTACGAGAAAAACGTTCA
AGAAGTGAAGAACGATGTCGTGCAAGAAAAGACGCGGTGGTTGTTGTGGAAAAGAAAGAA
GAACCCGTTGAAGATAAAAAAGCCAATAAAAAGCAACACAAAATAAGAAGAAAATTAATG
GGTGGTTTAATAAGAAGAAAGAATCGATCTATGCCGGATTTAACCGAAGGAGCTGATGGG
AAAAGCGATACCAAAAACAAAGAAATCCGTATTTTATCTGTCGATGATGCGGATGTGGGC
AGGAAAAAGAACGATGACAAAACAAATCTCAGTGGCTATTTGTCTGAGGGACATCTAGAA
TATTCAGCAGGAAGTGGCACCAATCCCAACTTAGAAAGAAGTAAACTTATGAGAAAGAGT
TTTCATGGCAGCGCTGGAAAAATATTGACTGCAGCAAAAGTGCCGCCGCCACCGCCATTG
CGGACCACTTCTCAGCTTAGCGGGACTAAGTTCGAGGAAGAAGGAATGAAGCACAACGTT
TATACACCACCAAAACAAATTTTGCAAGCCGATAAAGAAGAGTATTCTTATAGCACACAT
GAAAATGAAGAAGATGGCGGATTCTCTGAACAATTTGGCGACGAACCGCGGTCTCTACCT
TTTTTACCGTTACCTTATGATGACAATCAAGTGATTCATTACAACAACAACAGATTGGAT
GACTCCCCTAATACATCTCAAAACTTTCAAACTGTTGTTACCAAGGCTATGATTCACCAC
GAACAAAGTCCAGTAAAAAGAGAAAATATTTTAAACATAACGCCGTCCCACAACAACGTG
CATAACTTGACAAATATATTCGATAACGGCGTGGACGTGGTAGACTGCGGTATGCTCATG
CGGAGATCGCCGCAAATGTTTGACCTTCCACCGTATCCGAGTCCTCTGAATTCAGTTAAT
CATTCTAGACAGCAAAGTGAGGAATTCCCACCGCCTCCAGAACCAATAGATTTGACACCA
CTACAGGAAGAACTTCATAAAATAGAGTATCAAAAAAATAATGACAACATCGACTGTTTC
AATAACAATTTCAATAATAACGAGTCGGAAACTCCAAAGAGTTCACTATTAGCTGAATTA
CAAGAAAAACGGAATCAAATTTTCAAACAAGAAACAAACATAAAGCAAAATCAGTTAGAA
AACATTGGTACCTCTGATGACAATTGGCTGAGAGAGTTACAAGCAAAACAGGCCGTACTT
AAGCTTAAAAGATCGGGTTCACTTGAAGGTCAATTGTCCAATAATCAGGAAATTTATACT
CAAAACGCAGATTCTATCAGAAACGTCAGAAATATGGCTTCAAGATTCGAAAATAACGTG
CATAATGTGAGCAATGAAATCGAACGGAACCATAGTGGATACATGGGCATGTCGGGCAGC
CGTGACGTCATAAACTGTTCAAATCAATCAAATAACAGAATGTACAATCGACGCTCATCA
TCGTCCTCCATTGATCCAAAGCAAATGGAAGAAGAGTATAATGACCAGAAATCAAAACCC
AAGAAGAAATCTGTATCTTTTTGTGACCAAGTGATATTGGTCGCTACAGCCGAGGATCAA
GAAGACGACAGTTACATACCCAATCCTATTTTAGAAAGGGTGTTGAAATCTGCGATGAAT
AAGCCAGAACTCACCACAGTACCTTTGCAGAACGAAAAGAACTCTCTACAACGAACAGAC
TCATTTGACAGCCAGTCTTCAAGATCCACTATATCTTCCGTATCGCAAGCATCTTATAGA
CAGACTGATAATGGACATGTTGATTACTACAGAATCCAAAACTCATACCCGACTTACCAA
ACTCAAACGAGATCACAACCACAGTTCAATACGCAGAAAAATATTCCAGCACAGAACACA
AATTCTCCGTCGGTAAATAATCAAAATTCTAACATACAAAGCAACAATCAAATATACATA
GCTGTGCCAACCAACAGTCCTCTAAATAATAATAATCCAATACCGTATAACCACCCACCG
GCAGCATATCCTAACCAAAACAACTCAAACTCACCGAATTATAGTCAAAATACTGCCAAT
AGAATGACCCCTACATCGCACAATCAGCTTTATGCGACTAAACAAATGCAAAGACCATGC
AATACATACCAACAACAGCCTGGTTCCATACAAACAAGCAACCCTAATGGCAATTATCAC
AGACTTCCTCAACATCCTACAACGAATCAGCTTCAAGGAATGTATCAAAAACGACAGTTC
GCACAAAACGACAGCAATAGGCCATATCAAAGTGTGCCAGCAAACTCACCGGCTTACCAA
AGCTACCACAACCCACCGACGAATTACGTTAACACCGATTACTCTAGTCGTTATCCCCAA
GTTAATAGTTCCAATTTCAATCACTCGCCGTATCAAAGGGTCCCGCCTCCACACGGAGAG
GTGCCCGGCGAAGACTACAACAGTAATTATCAGAAAATACCCAGCAACCGTTACGACAAC
AGCAACAGTCGCACACCGGATGCGAGGCATTACGCTAACTCCCAACAGCGGCCGTACGAA
ACCGCTCTAGATAATGTCAATAATGAGCCATACCAATATCAAAACGGCTACAATCCCTAC
CAACATCTGGTGCCGCCGAAACAAATCCAGAAGAAATCGGTGTCATTTGAACCCGGGACG
AAGGGAGGAACGGACTCTCCCGTCCCGTCACAGATGAACGGCCACTACCAAGCAGAAAAC
CAGACGAATCCATCAATGACCAGCCACAAGACGCCTTGCAACTTATGTCGCAAGAAAACC
GTCAACCCCCCCGCCATTTACTGTCCCGATTGTGACTTTTACATGTCAAGGTTCAAACCG
CGGTCATAG
Protein sequence:
ELFAQLQWSAERAPAADGLRRALGGGGARFQLGCMADASECFEHLLLRVHAHVAAGTGDK
REDDACRVPHCVPHRKFAMMLVEQSVCGACQATSEPLPFTQMVHYVSATALTAQAALGEV
GDSFGTLLRKAGGMGDVRDCPNACGAKIQICRTLMNRPEVVSIGMVWDSDRPSAEQVSSV
YAALGTELRPTDAFHACVDRAWAARATHRLVGLVTYYGKHYSTFFYHSKLRLWIYFDDAD
VKEVGPEWCQVVEKCRRGRFQPLLLLYAAIDGTPCDTRHAPKDVVPFPAPEPRRAVTPAP
ERPAAAYARRAVTPGPDNDSDYVNRKAVENMFEVQASRRAQLGRSLSASSASDTQERPRS
RRDSGNWSGDRNSASSTSSNNESPYMFTRGRGSGSIPSSPTRKGELSSGGSCDAGYDSYS
LSSTDSVSLQQGLRHNLQLAQIPELTTRGDCEALCLEADRLLEKSRHVEDAGEYESALAL
CDTAASKARAAMDAPYNNPHTMTFARMKHNTCVMRARSLQRRMAGMIRVTEIPQSAPVRN
TKGGLENSPTTIEIYATLPKKKGSKKSPKAVIDDDLETIPRERPPRYKSREEEKVREKRS
RSEERCRARKDAVVVVEKKEEPVEDKKANKKQHKIRRKLMGGLIRRKNRSMPDLTEGADG
KSDTKNKEIRILSVDDADVGRKKNDDKTNLSGYLSEGHLEYSAGSGTNPNLERSKLMRKS
FHGSAGKILTAAKVPPPPPLRTTSQLSGTKFEEEGMKHNVYTPPKQILQADKEEYSYSTH
ENEEDGGFSEQFGDEPRSLPFLPLPYDDNQVIHYNNNRLDDSPNTSQNFQTVVTKAMIHH
EQSPVKRENILNITPSHNNVHNLTNIFDNGVDVVDCGMLMRRSPQMFDLPPYPSPLNSVN
HSRQQSEEFPPPPEPIDLTPLQEELHKIEYQKNNDNIDCFNNNFNNNESETPKSSLLAEL
QEKRNQIFKQETNIKQNQLENIGTSDDNWLRELQAKQAVLKLKRSGSLEGQLSNNQEIYT
QNADSIRNVRNMASRFENNVHNVSNEIERNHSGYMGMSGSRDVINCSNQSNNRMYNRRSS
SSSIDPKQMEEEYNDQKSKPKKKSVSFCDQVILVATAEDQEDDSYIPNPILERVLKSAMN
KPELTTVPLQNEKNSLQRTDSFDSQSSRSTISSVSQASYRQTDNGHVDYYRIQNSYPTYQ
TQTRSQPQFNTQKNIPAQNTNSPSVNNQNSNIQSNNQIYIAVPTNSPLNNNNPIPYNHPP
AAYPNQNNSNSPNYSQNTANRMTPTSHNQLYATKQMQRPCNTYQQQPGSIQTSNPNGNYH
RLPQHPTTNQLQGMYQKRQFAQNDSNRPYQSVPANSPAYQSYHNPPTNYVNTDYSSRYPQ
VNSSNFNHSPYQRVPPPHGEVPGEDYNSNYQKIPSNRYDNSNSRTPDARHYANSQQRPYE
TALDNVNNEPYQYQNGYNPYQHLVPPKQIQKKSVSFEPGTKGGTDSPVPSQMNGHYQAEN
QTNPSMTSHKTPCNLCRKKTVNPPAIYCPDCDFYMSRFKPRS