| New model in OGS2.0 | DPOGS203041 |
|---|---|
| Genomic Position | scaffold558:- 44500-46525 |
| See gene structure | |
| CDS Length | 1053 |
| Paired RNAseq reads | 579 |
| Single RNAseq reads | 1819 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006541 (1e-63) |
| Best Drosophila hit | CG6961 (3e-21) |
| Best Human hit | polymerase delta-interacting protein 3 isoform 1 (2e-08) |
| Best NR hit (blastp) | polymerase delta interacting protein 3 [Bombyx mori] (9e-87) |
| Best NR hit (blastx) | polymerase delta interacting protein 3 [Bombyx mori] (6e-90) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR000504 RNA recognition motif domain |
| Orthology group | MCL17983 |
Nucleotide sequence:
ATGGCTTCATATGTTAATATGAGTCTAGATGATATAATACAAAAACAGAAAAAGGATTCT
GTTAGTAGGAACACATTTAAAAATAAAAAACAATTACCAGTGAAAAATAAAACTATCATG
GATGCAAGAAACAAAATAATTTCTAAAAAACGCACTCAAATCACAGATGCCAGAGAAAAA
TTAGGCGAACTTGCCAAGCAAAAAGATGCACGTTTAAGATTGGAGCAATTAAGAGCGAAA
AGGGCCGTGACCAAGATGCAGGGTGGCTTCATTTCTCATAAACATGGGAGGCCCAATAAG
CAATTTGCTATGAAAGAAAGAGTGTTTACAGATCCATCAAGACAAGTAGCTTATCAATCC
CTCACACCAAAGTTTGTGAAAAAGAATGTCTTTAATAAAAGATTTGTAGGAGAGAGACCA
AATGAACCAAGAAATTTTGCTGATGTAAAATGCAGTTACAAACCTATTATAAGGACTGTC
GAAAATGATATTGCAATAATTGATGATCCACTTGAGAAAATGTGTGAGCCAATAGGAACA
TCACTAACAAATAGGAAAGCGAGTCTGCAATTGAAAATAGTCACACATAATAGTGATGCG
CACAGGACAGCTACAATTGAGAAAGAGAAAAGCCCACCGAGACCTCCGTCTATATTAAAG
AAAAGGCCGATGGCTGCCTTGCGTACTGAAAATAAAGTTGAAAAGCCTGAAAAATCTAAT
CACGAGTACAGAATCATTGTTAGCAATTTAAGAAACTCTGTAACTGGAGGTGATATTGAG
GAATTGTTTGGAGATGTTGGCGGTATGGTAGAATCTCGACTAGTAAGACCTGGCACAGCA
GAAGTTATATACAAAACTGTTCAAGACGCCCAAAAAGCTGTGGAACTCTACCACAACAGA
CAGTTAGATGGTCAGCCCATGACATGTCTCCTTGTCACACCACGACCTAACACTGTAATG
AGGAACACAGGCAAACCAGCATTGTACAGCACCAACTCAAATGTTGTTCCAGACATATCT
ACCTTCCATAAAGTCTTATTCAGCAGCTTTTAA
Protein sequence:
MASYVNMSLDDIIQKQKKDSVSRNTFKNKKQLPVKNKTIMDARNKIISKKRTQITDAREK
LGELAKQKDARLRLEQLRAKRAVTKMQGGFISHKHGRPNKQFAMKERVFTDPSRQVAYQS
LTPKFVKKNVFNKRFVGERPNEPRNFADVKCSYKPIIRTVENDIAIIDDPLEKMCEPIGT
SLTNRKASLQLKIVTHNSDAHRTATIEKEKSPPRPPSILKKRPMAALRTENKVEKPEKSN
HEYRIIVSNLRNSVTGGDIEELFGDVGGMVESRLVRPGTAEVIYKTVQDAQKAVELYHNR
QLDGQPMTCLLVTPRPNTVMRNTGKPALYSTNSNVVPDISTFHKVLFSSF