| New model in OGS2.0 | DPOGS203045 |
|---|---|
| Genomic Position | scaffold558:- 18838-24053 |
| See gene structure | |
| CDS Length | 1893 |
| Paired RNAseq reads | 1093 |
| Single RNAseq reads | 3010 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001966 (1e-07) |
| Best Drosophila hit | mitochondrial Rho, isoform D (0.0) |
| Best Human hit | mitochondrial Rho GTPase 1 isoform 3 (9e-163) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0006915 apoptosis GO:0019725 cellular homeostasis GO:0031307 integral to mitochondrial outer membrane GO:0047497 mitochondrion transport along microtubule |
| InterPro families | IPR011992 EF-hand-like domain IPR018249 EF-HAND 2 IPR020860 MIRO IPR005225 Small GTP-binding protein IPR013684 Mitochondrial Rho-like IPR013567 EF hand associated, type-2 IPR013753 Ras IPR013566 EF hand associated, type-1 IPR018247 EF-Hand 1, calcium-binding site IPR001806 Ras GTPase IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002048 Calcium-binding EF-hand |
| Orthology group | MCL12403 |
Nucleotide sequence:
ATGGTCTATGAAAGTATTCCTCGAACAGTTCGCATCATACTGCTTGGAGAACCCGGTGTT
GGAAAAACCTCTCTTATCCTATCATTGGTAACTGAAGAATTCGCAGAACATGTCCCTCCT
AAAGCAGAAGAGATTACAATACCTGCGGATGTTACTCCGGAGCAGGTACCGACCAACATT
GTAGATGTGTGCTTGAATGAACAAACTATAGAACAGGTTGCGGAAGAAATTGAGAAAGCT
CACGTAATATGTATAGTATTTTCAGTAGACAAACAAGAAACATTAAATAAGATAGCTTCT
TATTGGTTACCATTTGTGAGGGATAGCTGTTCTGATGATTATAGGAAGCCTGTTATTCTT
GTTGGAAATAAAATAGATTTAATTGACTACTCTGTTATTGATAATATTTGGGACATAGCA
GAAGAATATCCTGAGGTAGATCGATGTATAGAATGTTCTGCAAAAACCCTCACAAATGTC
TCGGAAATGTTTTACAATGCTCAAAAAGCAGTATTACATCCCATTCATCCCATTTACTGT
ATTGAGGAACAAGAGCTGACAGAAAGGTGTAAAAAAGCACTGGCAAGAATATTTAAGATT
TGTGATATGGATGGTGACGGAGTGTTGGATGATTTTGAGATAACAATATTTCAGAAGAAA
TGTTTTGAAAGCCCCTTGCAATTGCAGGTTTTAGATGAAGTAAAATCAGTAATTGCACAG
AATGTGGCTGCTGGTATTGAGAACGATTGTATAACCATGAGGGGCTTTATATTCTTGCAT
TGCCTTTTTATACAAAGAGGAAGGAATGAGACAACATGGACAGTTTTAAGAAAGTTTGGA
TATGATGAGACCTTGGAACTGACACACAGTTATTTATATCCAAACATTAAGATCCCCATC
GGCTGTACTTCGGAACTTTCATATAAAGGGCAACAATTTTTAACACAATTATTTGAGAAA
TATGACAAAGATAAAGATGGGATGCTGAATCCAACAGAATTGAAGAATGTGTTCTCATGT
TGTCCTCGTATACCGTGGCATAATTTGCGCTATACAGTGCCTACAAATGAAAAGGGTTAT
CTGACATTACAAGGTTGGATGTGTCGGTGGACACTGATGACACTATTAGACTTGCAAGAA
ACAAGTGCCTACTTAGCATACCTGGGTTATAATTTTCTCGAAAATGATACCCAAAAATCA
GCATTTCACGTTACCAGAGACAAAAAGGTCGATATTGCAAAAAAACAATCAAGCCGGAAT
GTATATCAATGTCACATTATTGGACCAAGAACATGTGGCAAAACATCCATATGTAGGAGT
TTTCTAGGAATAGCGCATAAGAAAATAAAGCCTCATTCACACGAACGAGGCGACGGTAAC
AGCCCAGAGAACACATGCTGTATTAACACAATACATGTATATGGCCAGGAGAAGTACCTG
ATATTGAAAGAGATTCCAATAACCCGTGTGTCCGACCCCTTACAGCCTCATGAGGTCAAC
TGTGATGTGGCCTGTCTTGTGTATGATGTAGCTGCGAGTCGTTCATTCGAGTATATTGCT
AGAATATATATAAAATATTTCGCGGAAAGTCACATTCCTGTATTAATAGTAGGCACCAAA
GGAGATGCTTTGATCACGAGGCAGGAGTACATTCTACAACCAGAAGTATTCTGTAACAAA
TATCAACTCTTGGCACCACAAATATTCAACATCAGAGAAAATAAACATGATGTATTTGTT
AAATTGGCTACTATGGCAGCATTTCCACATCTGAAACACTTCGCAAGTATGGCGGGCGAG
AATTCCTCGTGGTGGAAGGCGGGTATTGGATTTGCGGCGGCAACCATCATGGGATTTGTG
CTTATCAAGATGTTGAACGTTCAACGTAAATAA
Protein sequence:
MVYESIPRTVRIILLGEPGVGKTSLILSLVTEEFAEHVPPKAEEITIPADVTPEQVPTNI
VDVCLNEQTIEQVAEEIEKAHVICIVFSVDKQETLNKIASYWLPFVRDSCSDDYRKPVIL
VGNKIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKTLTNVSEMFYNAQKAVLHPIHPIYC
IEEQELTERCKKALARIFKICDMDGDGVLDDFEITIFQKKCFESPLQLQVLDEVKSVIAQ
NVAAGIENDCITMRGFIFLHCLFIQRGRNETTWTVLRKFGYDETLELTHSYLYPNIKIPI
GCTSELSYKGQQFLTQLFEKYDKDKDGMLNPTELKNVFSCCPRIPWHNLRYTVPTNEKGY
LTLQGWMCRWTLMTLLDLQETSAYLAYLGYNFLENDTQKSAFHVTRDKKVDIAKKQSSRN
VYQCHIIGPRTCGKTSICRSFLGIAHKKIKPHSHERGDGNSPENTCCINTIHVYGQEKYL
ILKEIPITRVSDPLQPHEVNCDVACLVYDVAASRSFEYIARIYIKYFAESHIPVLIVGTK
GDALITRQEYILQPEVFCNKYQLLAPQIFNIRENKHDVFVKLATMAAFPHLKHFASMAGE
NSSWWKAGIGFAAATIMGFVLIKMLNVQRK