| New model in OGS2.0 | DPOGS211624 |
|---|---|
| Genomic Position | scaffold1433:+ 28642-30105 |
| See gene structure | |
| CDS Length | 849 |
| Paired RNAseq reads | 68 |
| Single RNAseq reads | 352 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011775 (2e-58) |
| Best Drosophila hit | CG33260 (6e-19) |
| Best Human hit | tRNA-splicing endonuclease subunit Sen34 (2e-25) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (1e-41) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (1e-40) |
| GeneOntology terms | GO:0005634 nucleus GO:0004519 endonuclease activity GO:0000214 tRNA-intron endonuclease complex GO:0003676 nucleic acid binding GO:0006397 mRNA processing GO:0016787 hydrolase activity GO:0000213 tRNA-intron endonuclease activity GO:0000379 tRNA-type intron splice site recognition and cleavage GO:0005730 nucleolus |
| InterPro families | IPR011856 Endonuclease TnsA, N-terminal/resolvase Hjc/tRNA endonuclease, C-terminal IPR006677 tRNA intron endonuclease, catalytic domain-like |
| Orthology group | MCL14301 |
Nucleotide sequence:
ATGATTCCCTTATATGTCAATAAAGGCGTCGCTTATGTTTGGAATGCGGATGATTGGTTT
ACTCTACGAACTACTCATCGAATATGTGGTGCTCTAATAGGATCACTTCCCCCCTTTCCT
CGCCAGAATGATTTTCAAGGCTTACCAATGGCTTTAATGTCAGTGGAGGCTGCGTTTTTA
GTTGAAAAAGGTATCTGTGAGCTAATAGAATTGCCTAACATAAATGATGAACTATCTCCA
GCACAGAAGCAACAGATAAAAAAAATGGAAGAGGGAATATTTAAAGATCAGAGCAAAGCC
ATGCATAAGAAAAGAGTAGATCAGATGTCACAGAAGATTGATATAATTGTTGCTGGCAAA
GTACAGAAACTAAAGGCCAAAGGAAAAACTGATCTTGAAATTGACAAAGAAGCTTTATTA
AAGGAGGAAATAAGTAAATTACCGATTTTGTCACCTAATTATGCCTTGGTACATTTACCA
ACTGAACATTACATAGATACAGTGAAAAGAAAAGTGCAAATAAATATTCTACAACCAAGT
ATTTTGGACCAAGTAGGATCTATTCACTATGCAATATATAAAGACTTATGGGAGAAGGGG
CATTACATCACTAATGGTTTAAATTTTGGATCAGAGTTTCTTGTTTATCCTGGAGATCCA
GTGAAATTTCATGCATCTTACATGGTGCGATGTATCAACAATTCCAAACAATGTTTTCAA
CCGCCAAGTTTGGTTGCATTCGGTAGACTGTCAGTGGCAGTTAATAAAATGGCTGTACTT
GCCTATTGTAGTGATTACGGTAAAGTTGAATACCAAACGCTACAGTGGCATGACAGCATT
AATGGTTAA
Protein sequence:
MIPLYVNKGVAYVWNADDWFTLRTTHRICGALIGSLPPFPRQNDFQGLPMALMSVEAAFL
VEKGICELIELPNINDELSPAQKQQIKKMEEGIFKDQSKAMHKKRVDQMSQKIDIIVAGK
VQKLKAKGKTDLEIDKEALLKEEISKLPILSPNYALVHLPTEHYIDTVKRKVQINILQPS
ILDQVGSIHYAIYKDLWEKGHYITNGLNFGSEFLVYPGDPVKFHASYMVRCINNSKQCFQ
PPSLVAFGRLSVAVNKMAVLAYCSDYGKVEYQTLQWHDSING