| New model in OGS2.0 | DPOGS201998 |
|---|---|
| Genomic Position | scaffold1412:- 18-9061 |
| See gene structure | |
| CDS Length | 1719 |
| Paired RNAseq reads | 3561 |
| Single RNAseq reads | 9170 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010406 (2e-26) |
| Best Drosophila hit | argonaute 2, isoform C (2e-16) |
| Best Human hit | protein argonaute-4 (5e-07) |
| Best NR hit (blastp) | argonaute 2 [Bombyx mori] (3e-41) |
| Best NR hit (blastx) | argonaute 2 [Bombyx mori] (1e-36) |
| GeneOntology terms | GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0030422 production of siRNA involved in RNA interference GO:0016442 RNA-induced silencing complex GO:0005515 protein binding GO:0030423 targeting of mRNA for destruction involved in RNA interference GO:0016246 RNA interference GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death GO:0035197 siRNA binding GO:0035087 siRNA loading onto RISC involved in RNA interference GO:0035190 syncytial nuclear migration GO:0007349 cellularization GO:0007279 pole cell formation GO:0004521 endoribonuclease activity GO:0035195 gene silencing by miRNA GO:0051607 defense response to virus GO:0033227 dsRNA transport GO:0007367 segment polarity determination GO:0070578 RISC-loading complex GO:0005737 cytoplasm GO:0045071 negative regulation of viral genome replication GO:0070868 heterochromatin organization involved in chromatin silencing |
| InterPro families | IPR003165 Stem cell self-renewal protein Piwi IPR012337 Ribonuclease H-like IPR014811 Domain of unknown function DUF1785 |
| Orthology group | ND |
Nucleotide sequence:
ATGGGACGAGGAGGAAAAAAGAAAAATGCACAAGAAGTAGAAAAAAAATTGAGTGGAGAA
TCATCTCAATCACAACCAAGTACATCCATTGCAACAGTTGCTGTGGAACAAAAACAAGAA
GTTGGCACTGAACAAGTTACACCAACACTCGAAGAAAAAGCTGTATCAGCTCAAGCTGAG
CAACCAAAAGATGATTCCAAAGAAGAAACCATTGGGTTAGGCCTCGATTTGGGTGAAGGA
AAAAAAAGGCGTCCTAGGAAAAAGAAATCTACGACTGTAGCACAAATGCTGTCTGAAGAT
ATTGCACAAAAAAATATCTCATTACAGCAGGAAACGCAATCCCATATAACACCTACGGCG
GTAACAACGCAGCCGTCTACGTCTCCGGCGTTGGGGAGCACAAGTCAATTTCCAGGACTC
GGTAGAGGTAGGGGGAGGGGCAGAGGTTGGGGTGTTCCTCAGCAGACTCCTCTGCAATCA
AAAGGGCTACAGTTTGCTGAGCAACAATATCCCGGCCAACAGCAATATGATGCTCAATCA
TACCCAGGACAGCAACACCCTGGCCAGGAGCAATATGGAGCTCAATCACACCCAGGACAG
CAACACCCTGGCCAGCAGCAATATGGAGCTCAATCACACCCAGGACAGCAACACCCCCCT
GGCCAGCAGCAATATGGAGTTCAATCACACCCAGGACAGCAACACCCTGGCCAGCAGCAA
TATGGAGCTCAATCACACCCAGGACAGCAACACCCTGGCCAGCAGCAATATGGAGCTCAA
TCACGACCTAGACAGCAACAATCTTCACAAATGCAACAAAGCAGGTCATCGAGTATTGCT
TCTATAGCATCATCTTCGAGCAGCGGTGCATTGAGCCGGTATAAAATACCGGCAAGAATA
GAAGGCCGCTCGGTCAGGAGTACAAATATTAAAGTTTTGACCAATTACTTGGAAATGAAA
ATTAAGGATGTCAAAGTTGTCGGAAGACAATTCTTCAAACGTCCACAGAATCCAATAGAT
TTAGGTTTTGGATTGGAAATGTGGACGGGTCTATTCCAGTCGGCCATATTCACTTGGCGG
CCGTTCATAAATATCGACGTGGCCCACAAAGGTTTTCCGCGGACTCAATCTGTACTGCAG
GCTTACATGAATGATTTTAAATTGAATCCAAATCAATGCCTTGAACAACAAAGGGGATAT
AATGTCGAATTATTCAGGCAATATTTAAAGGGACTTAAGATGAATTATCCAGCAAATCCA
ATATTCAAGCATTTTAAATTGGAGATTGAGAAGGACTTTTTCAAAGTCGATGCAAAAATA
TTGCAGGCGCCAAAGTTAGATGTTGGTGCTGGAAGAGGGGTCGTGCCCAGGAATGGATCG
TGGCAGGCTAATCGCTTCTTAAAACCCAGCGCATTGGAATCCTGGGGACTCATAGTAGTT
GATGCAGATCCAAATGCTTGTAGATGCGAAGAGTTCATGCAAAATGTTAAACAAATAGCG
GAGTTGGAGGTCGGATTACTAACGCAATGCATAAAAGAGTTCACAGCAAAAGCTAAGATG
AGCGATCAAACCATACGTAATATACTTTTAAAGGTTAATTCAAAACTGATGGGTGTGAAC
CAAGCATTGGACGCGTCATCCATACCGAGGTGCATCAGTGAAGGCGGTGTTATGTTGGTT
GGCGCTGACGTCACTCACCCCTCCCCTGATCAGGTTTGA
Protein sequence:
MGRGGKKKNAQEVEKKLSGESSQSQPSTSIATVAVEQKQEVGTEQVTPTLEEKAVSAQAE
QPKDDSKEETIGLGLDLGEGKKRRPRKKKSTTVAQMLSEDIAQKNISLQQETQSHITPTA
VTTQPSTSPALGSTSQFPGLGRGRGRGRGWGVPQQTPLQSKGLQFAEQQYPGQQQYDAQS
YPGQQHPGQEQYGAQSHPGQQHPGQQQYGAQSHPGQQHPPGQQQYGVQSHPGQQHPGQQQ
YGAQSHPGQQHPGQQQYGAQSRPRQQQSSQMQQSRSSSIASIASSSSSGALSRYKIPARI
EGRSVRSTNIKVLTNYLEMKIKDVKVVGRQFFKRPQNPIDLGFGLEMWTGLFQSAIFTWR
PFINIDVAHKGFPRTQSVLQAYMNDFKLNPNQCLEQQRGYNVELFRQYLKGLKMNYPANP
IFKHFKLEIEKDFFKVDAKILQAPKLDVGAGRGVVPRNGSWQANRFLKPSALESWGLIVV
DADPNACRCEEFMQNVKQIAELEVGLLTQCIKEFTAKAKMSDQTIRNILLKVNSKLMGVN
QALDASSIPRCISEGGVMLVGADVTHPSPDQV