| Genomic Position | scaffold482:- 39036-41168 |
|---|---|
| See gene structure | |
| CDS Length | 2133 |
| Paired RNAseq reads | 37 |
| Single RNAseq reads | 131 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012557 (0.0) |
| Best Drosophila hit | CG42573 (3e-24) |
| Best Human hit | slit homolog 3 protein precursor (9e-09) |
| Best NR hit (blastp) | PREDICTED: similar to GA20668-PA [Tribolium castaneum] (6e-90) |
| Best NR hit (blastx) | PREDICTED: similar to GA20668-PA [Tribolium castaneum] (4e-65) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL19046 |
Nucleotide sequence:
ATGATGAATAATAACATAACAAGTTTTCGTCTAAATATAAATACGAACAATATGAAAGAA
ATGGATTTCACTAGCAACAGATTGGAATATATAAGTAATGGACTATTCAATAACTTTACG
AACCTACGAAAATTAATTTTGCGTCGAAATTTAATTGCGATAATCCAAGAAAATAGTTTT
TTGAGACTCACAAAATTGGAAACATTGGATCTATCTGAAAATCATCTAACAGTATTGACT
AACGTTTTTTATCCATTAAAAAATCTTCAACATCTAAATTTAAGTCGTAATAATATACAA
TTTATTCACGACAACTATTTCAATAATTGGTTACTGCAACATTTAGATATATCACATAAT
AATCTAAAGAAAGTGACTCCTGGAGCATTACAACAATTACCTAATCTCGCACGGCTGCTT
CTGACAGATAACCCGCATTTGGGGATCACACAGTTGGATACACAGCTTTTAGTTGGTACC
GGTCGCAGGCTACAACAAATTGATGCATCGAGAACCGGTCTTTGCCAAGTTCCTGAAGCG
TTCACGCATTCTGTAAGATTTCTATCTCTCGTGGGAAATAAAATTACATCGATACGATGT
GGTGATCTTGATAGTTACCCCCTATTGCAGTCATTGGACTTTTGTGATAATAAAATTATA
TCTATTGAAGATGATTCATTGGGACGTCTGGAAATGCTATTGTTTTTAAATATTAACAGT
AATCTTTTATCATCAGTACCAAGATCACTACCAGATGGTTTGGAGTACTTATCAATCAAT
GAAAACTCTATAAGCAATCTTTCAAAACCAGACTTTAAGGATTTAAAACATCTTCGAATA
TTGCTGTTAAAGGATAACCAAATAAATTATATTCAAGATCACATTTTTGACGACTTACTT
TCCTTAGAAATGCTAGATATTTCTAATAATCCAATAAAAATGTTATCACCAAGCACATTC
GATGGGCCACTATATCTTCGGGATTTAAGGCTTTGTCATTTAAATACATCTGTACCCGAA
AAAGATGGGTCGTTTCCTTTGTCATCGCCAGAAAGCGTTCAAATGCTTCATCTTCAATCT
AGCCCCGGCTTAGCGCGGCAATTGTTATCTGACTCAGCGGCATTAGCGGCTTTTTCACAT
CTACAGTATTTAGATTTGAGAATGAACAATATATCAAAAATACGTAGTGATCTTTTATTT
TATTTGGGACAACTGAAAACATTAAGACTACACGGTAATAATATAAATTGTAGCACAGAA
CTATGGCTTTCAGATTGGATGAAATGGAATCAAAGTCTCGTAAGTACTGAGACCTGTTAT
TATTCTACATTAGAATCCAAAGCAGAGATGTCTAAATACAACTGTACTTTTCCTGAATCG
TTCACCTTAAGTGAAAGCTTACCACCCATAAATTTATATAGTACAGAAATGATAAATAAG
TTATTACGATACTATGGTTACTTAAATAATAAAACCGAGAAATTTGAGAATACCAGCAAA
GTATTACGGAGCGAAAAACAATTAAAAAACAACAACATAAACAGATCAGAATATCATAAT
ATTAACAATGGATCATTAGTTAAAGACCTTCCAGATAATAAAGTACTATTGCATGACTTT
TTAAATGAAATATCAAATATGAACGATAAAGGATCGTCCAAAATTTTTGATCAAAACAAA
ATTCAAAAAGATCAATTAAATTCGAACCGTAGATTTTTAGACATCACATCGCATGTATCG
GTAAGGATTCAGACAGAAAAAAAAGATTACAGACAGATCACAGCGGTCCGTAGCGAGGAA
ATATCTGGAAAACGTTTAAATACACCGGTAATGACAACAGAATCTAAACCAATTACTAGG
TTTACTGAAAATCAAAATATTCAGGATGCCGATGTAAGCGAGGTTAACACGGTTAATCCG
AATGTTCGATTGAAATATTCATCGCACCAAGGAGTTTATATTAACTATGCTCAGAACATT
GGCATGGCGTCAGTAATTAGTCTCATGTTAGTTTCCGTTATACTGTGGGCGAGTTTTCGT
TTGAGGTATAAGAGAAGACAGCTACGAGCTTTGAATACTGATATGGAGGACCAAATAGAA
GTGTCAAATATATCGGGTGGAGTGTTGTGGTGA
Protein sequence:
MMNNNITSFRLNINTNNMKEMDFTSNRLEYISNGLFNNFTNLRKLILRRNLIAIIQENSF
LRLTKLETLDLSENHLTVLTNVFYPLKNLQHLNLSRNNIQFIHDNYFNNWLLQHLDISHN
NLKKVTPGALQQLPNLARLLLTDNPHLGITQLDTQLLVGTGRRLQQIDASRTGLCQVPEA
FTHSVRFLSLVGNKITSIRCGDLDSYPLLQSLDFCDNKIISIEDDSLGRLEMLLFLNINS
NLLSSVPRSLPDGLEYLSINENSISNLSKPDFKDLKHLRILLLKDNQINYIQDHIFDDLL
SLEMLDISNNPIKMLSPSTFDGPLYLRDLRLCHLNTSVPEKDGSFPLSSPESVQMLHLQS
SPGLARQLLSDSAALAAFSHLQYLDLRMNNISKIRSDLLFYLGQLKTLRLHGNNINCSTE
LWLSDWMKWNQSLVSTETCYYSTLESKAEMSKYNCTFPESFTLSESLPPINLYSTEMINK
LLRYYGYLNNKTEKFENTSKVLRSEKQLKNNNINRSEYHNINNGSLVKDLPDNKVLLHDF
LNEISNMNDKGSSKIFDQNKIQKDQLNSNRRFLDITSHVSVRIQTEKKDYRQITAVRSEE
ISGKRLNTPVMTTESKPITRFTENQNIQDADVSEVNTVNPNVRLKYSSHQGVYINYAQNI
GMASVISLMLVSVILWASFRLRYKRRQLRALNTDMEDQIEVSNISGGVLW