| New model in OGS2.0 | DPOGS208152 |
|---|---|
| Genomic Position | scaffold3398:- 390-15662 |
| See gene structure | |
| CDS Length | 3096 |
| Paired RNAseq reads | 1880 |
| Single RNAseq reads | 4619 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013771 (0.0) |
| Best Drosophila hit | CG10188, isoform A (2e-117) |
| Best Human hit | A-kinase anchor protein 13 isoform 2 (4e-47) |
| Best NR hit (blastp) | PREDICTED: similar to RHO guanyl-nucleotide exchange factor [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | Rho/RAC guanine nucleotide exchange factor, putative [Pediculus humanus corporis] (3e-178) |
| GeneOntology terms | GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0005622 intracellular GO:0035023 regulation of Rho protein signal transduction |
| InterPro families | IPR000219 Dbl homology (DH) domain IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding IPR015721 Rho GTP exchange factor IPR011993 Pleckstrin homology-type |
| Orthology group | MCL14424 |
Nucleotide sequence:
ATGGAGTCTGAGGGGGAGGTGTCACGGCCAGTACGACATTCAACTCACTCGTTGAATGAC
AACGATTTAGCTAAGGAGTTCGAGAAGGTAACTGCAGCATTACGTGCTGCCGCTGACACC
AGCTCCAGCAGACTGCTGCCACGTCTGCCGCTGCAGAAGTCCGTCTCCACACCGAGCATC
GTGGCCGCCGTACATCCGACACAACCACCCCCAGCCGCCAATATTCTGTCAGCGGGTGGT
GCGAGCGAGACGGAGAGTGACGACGACACGTCCGCGCCGGTCGCCAACCAGCCGAGAAGG
AATAACACTCAGGAGCACCTCGGCTTACATCGGCTGGCGTTCTTGGAACAAGCCGCCTTC
GACCATCACGCTGAGAAACGCCGTAAGAGAGGAAGCTTGTTCTTTAGGAAGAAGAAGGAC
AAATCTCGCAAGGCCTCTCACGTGTGGTCGGCGGCCGCGGCTGGTGGTGCATGTGATTGG
TGCGCGAGGGACCTGGCGGACAAACCGGCTCTGTACTGTGACAATTGCACTATGACGGTT
CATCAGAACGTTTGTAAGGACTACATTGTTGAATGCAATAAACCAAAATCATCCAAGACG
TCCGTGGGCAAGTCGCTAAGCGCCAGTAGCGGTAAAAGCAGCAAACGCAGTTCCGTTTCC
GGTCAATCACAGAACTCTAACAGCACGAGTCATATTTATAATGACGATAAAGACGGATCC
GATCACAAGCACGATCAGAGCAATGCATCAGACGACGCTTCCACTGAATGGCCGGAGGTT
TATCTGACAGCGGAACAGTTAGGTGATGAAGCGATACAGCTGGGCTTGGGGGCTGTCGAA
CCTGACACCTGGGCAGCTGGAGCACCTAAAGGACTTGCTAAACAAATCGGCGACAGAGAG
ACCAAGCGCCAGGAGCACATATATGAACTAATATTAACCGAAAAACATCATTGCCTCACC
GTGAGGCTCATGCAGAAGATGTTCGCCGATGGTCTATCTCGTCTTGGAGGCGTGTCTTCA
TCACAGGTCTCCCGTATGTTTCCTCGTCTGGATGAACTATGGTCGTTGCACGCGGCGTTG
CTCGCACGACTCAGGGCTCGCCAGCGCGTTGGCCCACGAGTGGCCAGCATCGCCGATATA
TTAGCGGATACGTTCGCAGCGCCACATCACCAAAGGCTGAAGGCTGCATATGGTGAGTTC
TGTTCGCGTCATCGTGACGCCGTCGAGGTGTTCAAGGATGTCTGCGCGAGGGAGACGAGG
GTCGCACGGTTCATAAGGAAATGTCAACAGAATCCACTACTCAGGAAGAAGGGTGTTCCC
GAATGCGTGTTGTTCGTGGCACAGAGACTCACAAAGTATCCCCTACTATTGGAACCGCTC
CTCAAGACCGCGGGTGACGATGCACACGAACGTGAACTATTACAGAAAGCACTGTGCGGT
GTGAAGGAAATTCTAGTCGACGTTGACAACCAAGTGGCGGCAAAAGAGAGAGAAGACAGG
AAACTGGAGATATATCATCGTATCGATGCAAAGTCCTTCGCCAATTATCGCGGACGGAAG
TTTAAGAAGAGCGACATCCTGCAAGGGAATAGGAGTCTTACATTCGAAGGTGTAGCGACT
TTGATGCAAGGTAGGAGTAAAATGCAGACGCTCCTAGTGATAGTGTTGACGGACGTGTTG
TTCTTCCTTCACGACAACAACAACAAATACACTTTCTTCACGCCTGACAATAAGACTGGT
GTAGTATCTCTATGGAAGTTGTTAGTTCGCGAGAAGGCCGGAGCCGACGGCCGAGGCCTG
TACCTCATATGTAGCGGGCCGCCTGGACCCGAAATGTTCGAACTAAGAGTTCATCGACCC
AAAGACATCGCTCAATGGATACGGGCTATACGAGGGGCAGTTCAAAGCTGTCCCGAAGAA
ATAGAAGAATCTGAAGCTGGGAGTACCGTGACGTCAGCAGAAGAGAGACAGAAACAGTTG
GAGGCGAGGCATGAGAATATAAGACTGATTACAGAGGCTTTGAGGGCAAAGGACAGAGAG
CAGGCGCAATTGTTGGAAGAGAAAATGGTGTTGCATATGAGGATGGTCGGACACACCGGG
AGTTCCGCCTTAGATGTACCCAGCACAGGTGTGCCCCCCTGTCCCGGGGGATTGTCGTTC
CCGGAGTACGTCCGTCTATCAGGACCCACGCCAGACACGCACGCCTTATGGCAGGAAGTC
TGCAGGGTCGTTCAGGATGCTCTGGAGGCGTCGTCCCTGGGCTGGTCGTCTCTCAGCGGC
GTGTCTCTGGGGCGAAGCACGAGCTCGGCGGGTGAGAGGCACTCGGTCCACTACACCAGC
CCCGCTCTGCCGAGGAGGGCGGACACCTTCGCCGGCTTCGACGCGCATAGAGGGGGTGTG
TCCGTACGTCTGTCGGCGTCGGACGTTCCCAGCGAACCGGAAACGGAAGCCCAAATGCAC
GCTCGGATCAAGGACGAAGCGAACGCTGCGCTGAAACTACAACATGCCATATACACGCTC
ACCTGTATAGTGTGGCAGCAGCTGACCACCATACACAGCCTGGAGGCGCAGGTGTGTGCG
TGGAGGGCGTGCGGGGGGGCGGGAGCGGCCGCGGTGGGCGGGCGGGCACACGACGCGCAG
CTCGAGGAACTGAGGCACGCACAGGCGAGGCTCACGGCGGAGAGGGCGGCCTGGGAGGCG
CAGAGGACGGCCGACAGGGACGCGCTGGAACATGATCGTAGACAACTACAGGCAGCGCGA
AAGGAGCTGGAGGAACAACAGAAAGACGTTGAACAACAGAGAGAAAGGCTCTACAGGCGC
CTGGAGAGATTACAACAACACGGTGGCGGATCTCAAGAGGAAATAGCTAGCGTTGGAACT
CTGTCGCCTGATTCAAGTGTCAGCGATACCAACAGAAGGAAAGAACCAAAATGGAGAAAT
AACCGCGGTTCAACCGGCTCGGAGTCGTCGTTGAGCGCCTGCAGCGTCCGCGGCGCTGCA
CTGCCACCGCCACAGCTGCTGTCGGCGCACAACGAGACGAGAGCCACAGCGCGCGCTCCG
GTACAGGTGATGCGAGACTGTTCTAGTATGAGGTAG
Protein sequence:
MESEGEVSRPVRHSTHSLNDNDLAKEFEKVTAALRAAADTSSSRLLPRLPLQKSVSTPSI
VAAVHPTQPPPAANILSAGGASETESDDDTSAPVANQPRRNNTQEHLGLHRLAFLEQAAF
DHHAEKRRKRGSLFFRKKKDKSRKASHVWSAAAAGGACDWCARDLADKPALYCDNCTMTV
HQNVCKDYIVECNKPKSSKTSVGKSLSASSGKSSKRSSVSGQSQNSNSTSHIYNDDKDGS
DHKHDQSNASDDASTEWPEVYLTAEQLGDEAIQLGLGAVEPDTWAAGAPKGLAKQIGDRE
TKRQEHIYELILTEKHHCLTVRLMQKMFADGLSRLGGVSSSQVSRMFPRLDELWSLHAAL
LARLRARQRVGPRVASIADILADTFAAPHHQRLKAAYGEFCSRHRDAVEVFKDVCARETR
VARFIRKCQQNPLLRKKGVPECVLFVAQRLTKYPLLLEPLLKTAGDDAHERELLQKALCG
VKEILVDVDNQVAAKEREDRKLEIYHRIDAKSFANYRGRKFKKSDILQGNRSLTFEGVAT
LMQGRSKMQTLLVIVLTDVLFFLHDNNNKYTFFTPDNKTGVVSLWKLLVREKAGADGRGL
YLICSGPPGPEMFELRVHRPKDIAQWIRAIRGAVQSCPEEIEESEAGSTVTSAEERQKQL
EARHENIRLITEALRAKDREQAQLLEEKMVLHMRMVGHTGSSALDVPSTGVPPCPGGLSF
PEYVRLSGPTPDTHALWQEVCRVVQDALEASSLGWSSLSGVSLGRSTSSAGERHSVHYTS
PALPRRADTFAGFDAHRGGVSVRLSASDVPSEPETEAQMHARIKDEANAALKLQHAIYTL
TCIVWQQLTTIHSLEAQVCAWRACGGAGAAAVGGRAHDAQLEELRHAQARLTAERAAWEA
QRTADRDALEHDRRQLQAARKELEEQQKDVEQQRERLYRRLERLQQHGGGSQEEIASVGT
LSPDSSVSDTNRRKEPKWRNNRGSTGSESSLSACSVRGAALPPPQLLSAHNETRATARAP
VQVMRDCSSMR