| New model in OGS2.0 | DPOGS214746 |
|---|---|
| Genomic Position | scaffold1768:- 49136-58591 |
| See gene structure | |
| CDS Length | 3387 |
| Paired RNAseq reads | 3758 |
| Single RNAseq reads | 8838 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004740 (0.0) |
| Best Drosophila hit | piccolo (0.0) |
| Best Human hit | DNA damage-binding protein 1 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to DNA repair protein xp-e [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to damage specific DNA binding protein 1 isoform 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0006974 response to DNA damage stimulus GO:0005634 nucleus GO:0003677 DNA binding GO:0006281 DNA repair GO:0003676 nucleic acid binding GO:0003684 damaged DNA binding |
| InterPro families | IPR004871 Cleavage/polyadenylation specificity factor, A subunit, C-terminal |
| Orthology group | MCL13779 |
Nucleotide sequence:
ATGGCTTATCATTACGTAGTTACCGCACAGAAGCCTACAGCAGTTATATCATGTATCACA
GGAAATTTTACATCACCTACGGATCTGAACCTTCTAGTGGCGAAGGTGTCTCGCCTGGAG
ATGTACCTAGTAACTCCAGAGGGACTGAGACCTATGAAGGAGGTTGGGCTGTATGGGAGG
GTGGCTAAGATGAAATTATTTAGACCACCGTATGAGCAAAAAGATTTAGTATTCATACTG
ACGGCTCGTTACAATGCTATGATACTGGAATGGAGGACAGGGGCTAACGGGGAGCTGGAG
GTAGTCACCAGAGCTCATGGCAATGTTGCCGACCGTATCGGCAAACCATCGGAGAACGGA
ATTCTGGCAGTCATAGACCCACAAGCCAGAGTGATCGGACTCAGGCTATATGATGGATTA
TTTAAAATAATACCACTGGATAAAGATTCTACTGAGCTCAAAGCTGCTAGTTTAAGATTA
GAAGAGCTGAATGTGTACGACTTAGAATTTCTGCACGGATGCTCAAATCCAACATTAATT
TTAATTCATCAGGATCTCAATGGAAGACATATTAAGACCCATGAGATTAATTTAAGGGAC
AAAGAATTCATGAAGATACCATGGAAGCAGGACAATGTGGAGACAGAGGCTTCAATTCTC
ATTCCAGTTCCAAGTCCACTTGGTGGTGCTATTGTGATTGGTCAAGAATCTATTGTGTAT
CATGACGGACAAAGTTATGTAGCAGTTGCACCGCCACAGATAAAGACCCCTATCAACTGC
TACTGCCGCGTGGACGTTCGCGGTCTGCGCTACTTGCTGGGCGACATCGCCGGCCGCCTA
TTCATGCTGTTGTTGGAACTGTCGGAGCGAGATGGCACAGCCTCTGTCAGGGACCTCAAA
GTTGAACTGCTCGGTGATATCCCGATACCCGAGTGTATGACTTATTTGGACAACGGCGTG
GTGTTCGTGGGGTCTCGCTTGGGGGACAGCGCCCTGGTCCGGCTGGCCGCGGTGAGGGAC
GACGCCTCGCAGTACGTGCAGCCCATGGAGACCTTTACCAGCCTCGCGCCCATCGTCGAC
ATGTGCGTCGTGGACCTCGAGCGCCAGGGACAGAACCAACTCATCACGTGCTCCGGTGCG
TTCAAGATGGGTTCGCTGCGTATAATACGGAACGGGATCGGCATCCAGGAGCAGGCGTCC
ATAGACCTGCCCGGCATCAAGGGCATGTGGGCGCTCACACTCGGCCAGGGACCGCACCAC
GACACCCTCGTACTGTCCTTCGTGGGACAGACTCGTGTGCTGACTCTAAACGGCGAGGAG
GTGGAGGAGACAGAGATAAAGGGTTTCGTGTCGGACAGACAGACATTCTTCACCGGGAAC
GTGTGCCACGACCAGCTGATCCAGGTCACCGACGAGGGTATACGACTCATAGGACGCGGG
CCGGGTGGCTGGAACGGAGTCGCCGCCTGGGCCCCCGCAGGCCGAGCGGTGTCCGTGGTG
TCGTGTGGAGAAACGCGGGCCGTGGCCGCCGCTGGGCTGAGGATATACCTCGTGGCCATA
AAACAGGGGGCGCTGGAATTGATTTCTGAGGTGTGCATGAACGAGGAGGTGGCCTGCCTG
GACCTGGGCCCGGGAGGCGAGGAGGCCCTGCTGGGTGTTGGGCTATGGACTGATATATCC
GTCAGAGTGCTCAAGTTACCGGACCTCCGACCACTCCACACGGAGAAACTCTCTGGAGAG
ATAATCCCGCGCTCTCTTCTCATCTGTGTGTTGGAGGGCGTGTGTTATTTGCTGTGCGCG
TTGGGTGACGGCTCTATGTTCTACTTCACCGTAGACCCGGACAGCGGAGTGCTCACCAAC
AAGAAGAAGGTCACACTTGGCACGCAGCCCACAGTACTCAGGAGCTTCAGATCGCTGTCA
ACGACCAACATCTTCGCGTGCTCTGATCGTCCAACAGTTATATTTTCGTCCAACCACAAG
TTGGTTTTCTCCAACGTTAATCTCAAGGAAGTGGCCCATATGTGTTCACTCAACGCCGTG
GCTTATCCCGACAGCTTGGCTCTAGCCACGGACAGCACAGTGACCATCGGTACCATAGAT
GAAATACAGAAGCTGCACATCCGAACCGTGCCCCTGGGGGAGACGCCCAGACGCATCGCG
TACCAAGAAGCTTCGCAGACGTTCGGCGTGATCACGATGCGCGTGGACAAGGTGGAGTGG
ACGGGCGGGTGCGGCTCGCTGGTGCGGCCCTCGGCCTCCACGGCCGCCGCTTCCGCCTCG
GCCGCCGCCCCGCCCTCCAAGCACGCGCCCGCCCCGCTCGACCTCGAGCTCCACAACCTG
CTCATACTGGACCACCACACCTTCGAGGTCCTCCACGCTCATCAACTGCTGGCCAACGAG
TTCGCCATGTCGCTAGTGTCGTGCAAGCTGGCCGACGATCCCAACCACTACTACGCTGTG
GGCACCGCCATACTCAACCCCGAGGAGTCGGAACCCAAACAGGGGAGGATTCTCTTATTC
CACTGGTGCGAAGGAAAACTCACTCAAGTTGCTGAAAAAGAAATCAAAGGAGGTTGTTAC
ACGTTGGTGGAGTTCAATGGAAAGTTACTAGCATCCATAAATAGCACTGTTAGATTATTT
GAATGGACTTCGGAGAAGGAGTTGAGATTAGAATGCAGTCACTTCAACAATATTGTGGCC
CTGTACCTCAAAGTCAAGGGCGACTTCATACTTGTGGGAGATCTCATGAGGTCCATGTCT
TTGTTGCAGTACAAGCAGATGGAGGGTTCCTTTGAAGAGATAGCTCGTGACTACAGCCCC
AACTGGATGACGGCCGTCGAGATCCTAGATGACGACACCTTCCTCGGGGCCGAGAACAGC
TTCAACCTCTTTGTATGCCAAAAAGACAGCGCGGCCACGACCGATGAAGAGAGGCAGCAG
ATGGGCTACATGGGTCAGTTCCACGTCGGTGACATGGTGAACGTGATGAGGAGGGGCGCT
CTGGTCGCTCAACTCGCAGACACCGCCGCGCCCGTCGCCCGACCCGTCCTGCTGGCTACC
GTCTCCGGCGCTATATGTCTGGTTGTGCAATTATCACAGGAACTATTTGATTTCCTTCAC
CAACTAGAAGAGAGGCTCACACACACCATTAAATCGGTGGGCAAGATCCCTCACTCGTTC
TGGAGATCCTTCAACACTGATATCAAAACTGAACCAGCCGAAGGGTTCATCGACGGTGAC
CTGATAGAAAGTTTCTTAGATCTCTCCAGAGACATGCAGCAAGAAACCCTGCAAGGATTA
CAGATTGACGACGGCGGTGGCATGATGAGAGATGCCACAGTTGATGATCTCATCAAAATA
GTGGAGGATCTCACCAGGATACATTAG
Protein sequence:
MAYHYVVTAQKPTAVISCITGNFTSPTDLNLLVAKVSRLEMYLVTPEGLRPMKEVGLYGR
VAKMKLFRPPYEQKDLVFILTARYNAMILEWRTGANGELEVVTRAHGNVADRIGKPSENG
ILAVIDPQARVIGLRLYDGLFKIIPLDKDSTELKAASLRLEELNVYDLEFLHGCSNPTLI
LIHQDLNGRHIKTHEINLRDKEFMKIPWKQDNVETEASILIPVPSPLGGAIVIGQESIVY
HDGQSYVAVAPPQIKTPINCYCRVDVRGLRYLLGDIAGRLFMLLLELSERDGTASVRDLK
VELLGDIPIPECMTYLDNGVVFVGSRLGDSALVRLAAVRDDASQYVQPMETFTSLAPIVD
MCVVDLERQGQNQLITCSGAFKMGSLRIIRNGIGIQEQASIDLPGIKGMWALTLGQGPHH
DTLVLSFVGQTRVLTLNGEEVEETEIKGFVSDRQTFFTGNVCHDQLIQVTDEGIRLIGRG
PGGWNGVAAWAPAGRAVSVVSCGETRAVAAAGLRIYLVAIKQGALELISEVCMNEEVACL
DLGPGGEEALLGVGLWTDISVRVLKLPDLRPLHTEKLSGEIIPRSLLICVLEGVCYLLCA
LGDGSMFYFTVDPDSGVLTNKKKVTLGTQPTVLRSFRSLSTTNIFACSDRPTVIFSSNHK
LVFSNVNLKEVAHMCSLNAVAYPDSLALATDSTVTIGTIDEIQKLHIRTVPLGETPRRIA
YQEASQTFGVITMRVDKVEWTGGCGSLVRPSASTAAASASAAAPPSKHAPAPLDLELHNL
LILDHHTFEVLHAHQLLANEFAMSLVSCKLADDPNHYYAVGTAILNPEESEPKQGRILLF
HWCEGKLTQVAEKEIKGGCYTLVEFNGKLLASINSTVRLFEWTSEKELRLECSHFNNIVA
LYLKVKGDFILVGDLMRSMSLLQYKQMEGSFEEIARDYSPNWMTAVEILDDDTFLGAENS
FNLFVCQKDSAATTDEERQQMGYMGQFHVGDMVNVMRRGALVAQLADTAAPVARPVLLAT
VSGAICLVVQLSQELFDFLHQLEERLTHTIKSVGKIPHSFWRSFNTDIKTEPAEGFIDGD
LIESFLDLSRDMQQETLQGLQIDDGGGMMRDATVDDLIKIVEDLTRIH