| New model in OGS2.0 | DPOGS214747 |
|---|---|
| Genomic Position | scaffold1768:- 44722-45498 |
| See gene structure | |
| CDS Length | 777 |
| Paired RNAseq reads | 319 |
| Single RNAseq reads | 946 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004741 (8e-100) |
| Best Drosophila hit | CG6049, isoform A (1e-66) |
| Best Human hit | HIV Tat-specific factor 1 (4e-47) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC002366 [Tribolium castaneum] (6e-84) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC002366 [Tribolium castaneum] (1e-78) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR003954 RNA recognition motif domain, eukaryote IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL10840 |
Nucleotide sequence:
ATGCAGAAATGTGGTCTGGTTGAAAGAGATCCTGTGAACCAGAAGATGAAGGTCAAATTG
TACATGGACAAAGAACAGAACTGTTTCAAAGGTGATGCTCTCTGCACATACATAAAGATA
GAGTCCGTCGACCTAGCGTTGAAGTTACTTGACGGAAGTGATTATAAAGGAAACAAGATA
AAAGTTGAAAGAGCACAATTCCAAATGAAAGGTGACTACAATCCAGCTCTGAAACCTAAA
AAGAAAAAGAAGAAGGAATTAGAGAAGCTCAAGAAAATGCAGCAGAAGCTATTTGACTGG
AGGCCTGAAAAATTTATAGGAGAGAGATCAAAACACGAACGGATAGTTATAGTTAAAAAT
TTATTCCATCCGTCAGATTTTGATAATGATGTTCAGCTTATACTTGATTACCAGCAAGAC
TTGAGAGAGGAGTGCAGCAAGTGTGGAGAGGTGAGGAAGGTGGTTATATATGACGCACAT
CCCGAAGGCGTCGCACAGATCACTATGAAAGAACCCGAACAAGCCGACGCTGTCATCCAG
CTAATAAATGGCAGGTGGTTTGGAAAACGACAAATCACAGCAGAAACATATGACGGTCGA
ACAAAATATAGGATAGCGGAGACCGACGCTGATATTAATAAGAGAATAAACAAGTGGGAC
AAATTCCTGGAAGAAGAAGAAGCTAAGAAAGACAAGAATACAACAAATGAAAGCAAATCT
AACACGTCAGAGAGTGAGAAGGTATCAAGTGAAAAAGAAGAATCAGTTGAAAAATGA
Protein sequence:
MQKCGLVERDPVNQKMKVKLYMDKEQNCFKGDALCTYIKIESVDLALKLLDGSDYKGNKI
KVERAQFQMKGDYNPALKPKKKKKKELEKLKKMQQKLFDWRPEKFIGERSKHERIVIVKN
LFHPSDFDNDVQLILDYQQDLREECSKCGEVRKVVIYDAHPEGVAQITMKEPEQADAVIQ
LINGRWFGKRQITAETYDGRTKYRIAETDADINKRINKWDKFLEEEEAKKDKNTTNESKS
NTSESEKVSSEKEESVEK