| New model in OGS2.0 | DPOGS214748 |
|---|---|
| Genomic Position | scaffold1768:- 40394-43190 |
| See gene structure | |
| CDS Length | 1698 |
| Paired RNAseq reads | 786 |
| Single RNAseq reads | 1906 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004742 (0.0) |
| Best Drosophila hit | CG6420 (9e-113) |
| Best Human hit | WD repeat-containing protein 20 isoform 2 (5e-148) |
| Best NR hit (blastp) | PREDICTED: similar to wd-repeat protein [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to wd-repeat protein [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL11272 |
Nucleotide sequence:
ATGGCCGTGCAATCTGACTCTGGCGGGAAGGATGATGTGAAGACACAATTCGTGACTCGA
GAGGGGACGTACAGATTGATGACATTGTCCGAGTATTCGAGGCCTAATCGTGTGGGGTAC
ACCAGTGGCTCAGGCTCCTCTCACGTTCGAGTGTCTCTCGTTACCTTGCCGCCGGGGCCG
GAGGATGGAGCACCCGGTTCCGACGGACAGGGCTCCGATGACAGAATATGTTTTAACCAT
GGGAAGGAGCTTTATGTTTACGTTTATAGAGGAATCAAGAAGGCTGCAGATCTCACCAAG
CCGGTGGACAAAAAGATATACAAAGGCACGAACCCAACATGCCATGACTTCAACACGGTC
ACAATGACCTCGGAAACGGTGTCCTTGATAATAGGTTTCTCCACCGGTCAGATACAACTC
ATAGATCCTATTAAGAAGGAGTTAAGTAAATTATATAATGAAGAGAGGCTCATAGACAAG
ACTCGAGTGACTTGTATCAAATGGGTGCCGGGTTCCAGCAACCTGTTTGTGAGCGCACAT
GCCTCGGGCCAGTTGTATGTTTACAACGAGGAACTGGTCTGTGGGGCTGCACCGCACTAT
CAGCTGTTCAAGACGGGGGATGGTTACTCCATCCACACCTGCAGGACGAAGTCCACTAGG
AACCCCTTGTACAGGTGGGTGATAGGTGCGGAGGGTAGTTGTATAAACGAGTTCGCGTTC
TCGCCGTGCGGCGCCAACCTGGCCGTGGTGTCCCAGGACGGGTTCCTGCGAGTGTTCCAC
TACGACACTATGGAGCTGATCGGCCGAGCCCGGTCTTACTTCGGCGGCTTCCTGTGTGTG
TGCTGGTCGCCGGACGGCAAGTACGTCGTGGTGGGCGGCGAGGACGACCTCGTCACCGTG
TGGTCCTTCGGCGAGCGACGAGTTGTGGCGCGGGGTCAAGGTCACCGCTCCTGGGTCTCT
GTCGTCGCCTTTGACCCCTACGTCGTCGGCTTCGTGGAGGCCGACCGCGACCCCGGCGGC
GAGGGCGGCCAGTGCTACAGACTCGGCAGCGTCTCGCAGGACACGCAGCTCTGTCTGTGG
GACCTCACCGAGGACGTGCTCCGGCCACCGCCCCGCGCCCGCGCCTCCGCACACCTGTCC
CCAAACAGCCAGCACCTGTCGCCGAACGGCGTGCCCGGCACGAAGGCGCCGCGCTGTGGC
AAGACCAACAAGATCGGCCACAAGCACGTCGAGCTAAGCGGCGCCAACACGGCGGGCGAG
CCGTCAGGGACGAAGGCGGCCGTCCGCGCCAAGACCAACAACACGCTGGCCTCCAACACG
AGCGCGGCGCGTGGCAAGGACGAGGCATCCGTTTCGCTGGGCGCGCACCTGTCCCAGCGA
CTGGCCGGCTTCTCTTTCGGCGAGCGTCGCTCCGAGCACCGTCGGAACTTCAGCCTGGGG
AAGCCGGAGCGGCCCGCGGCGCCCCGGACGCCCGCCGCGGACCCGCTGCGACTTATCGGC
TCGCCGGCGTGTCCGCGATTCGACGAGTGTCCCGTGTTGGAGCCCCTGGTGTGCAAGAAG
ATCGCCCACGAGCGACTGACGGCGCTGCTGTTCCGCGCGGAGTGCCTGGTGACGGCGTGC
GCGGACGGCGGTGTCAACACGTGGGCGAGACCGCCGCGGCCCGAGCGCCGGCGGGACAGG
AGCGACCTCGTGGACTAG
Protein sequence:
MAVQSDSGGKDDVKTQFVTREGTYRLMTLSEYSRPNRVGYTSGSGSSHVRVSLVTLPPGP
EDGAPGSDGQGSDDRICFNHGKELYVYVYRGIKKAADLTKPVDKKIYKGTNPTCHDFNTV
TMTSETVSLIIGFSTGQIQLIDPIKKELSKLYNEERLIDKTRVTCIKWVPGSSNLFVSAH
ASGQLYVYNEELVCGAAPHYQLFKTGDGYSIHTCRTKSTRNPLYRWVIGAEGSCINEFAF
SPCGANLAVVSQDGFLRVFHYDTMELIGRARSYFGGFLCVCWSPDGKYVVVGGEDDLVTV
WSFGERRVVARGQGHRSWVSVVAFDPYVVGFVEADRDPGGEGGQCYRLGSVSQDTQLCLW
DLTEDVLRPPPRARASAHLSPNSQHLSPNGVPGTKAPRCGKTNKIGHKHVELSGANTAGE
PSGTKAAVRAKTNNTLASNTSAARGKDEASVSLGAHLSQRLAGFSFGERRSEHRRNFSLG
KPERPAAPRTPAADPLRLIGSPACPRFDECPVLEPLVCKKIAHERLTALLFRAECLVTAC
ADGGVNTWARPPRPERRRDRSDLVD