| New model in OGS2.0 | DPOGS214711 |
|---|---|
| Genomic Position | scaffold1768:+ 29880-38506 |
| See gene structure | |
| CDS Length | 2679 |
| Paired RNAseq reads | 955 |
| Single RNAseq reads | 2259 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004774 (2e-61) |
| Best Drosophila hit | CG12413 (1e-146) |
| Best Human hit | translation initiation factor IF-2, mitochondrial precursor (7e-126) |
| Best NR hit (blastp) | PREDICTED: similar to mitochondrial translational initiation factor [Tribolium castaneum] (8e-178) |
| Best NR hit (blastx) | PREDICTED: similar to mitochondrial translational initiation factor [Tribolium castaneum] (2e-166) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0006412 translation GO:0003743 translation initiation factor activity GO:0006413 translational initiation GO:0003924 GTPase activity GO:0005525 GTP binding |
| InterPro families | IPR023115 Translation initiation factor IF- 2, domain 3 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR015760 Translation initiation factor IF- 2 IPR000795 Protein synthesis factor, GTP-binding IPR005225 Small GTP-binding protein |
| Orthology group | MCL11504 |
Nucleotide sequence:
ATGTACAGAAGTGTTTTGTTTAGCAGGTTGTTTGTAAGACAGTATAAAAATGACTTAACA
CAAATATTAGAATCAAGGAAATGCTTTTCAAATGACTTTTATAATAAGAAAAGCTTTATG
AGACAAATATCTACATCACGCATAACATTGAAGAAAAGAAAATCTATTGAGGAGAGGCAT
ATAGAAAACCAAGGCAGAAGAGTTATCAGGTATTCCCCTAAGGCTGGTTCGGAGGTGGTC
GGGATATGGAAGAATATGACTGTCAAGGAGATATCTGATGTACTTCAGAAGGATGTCGAG
CACATTTACAACGCATTGCAGTTTGCGGACAAGAACTCCGAAGTTGTTTATAAAGAGGAC
ACCGTTATACATAATCCACAAATAGTCAGGGATGTGGTAAAGATATCGGGATATAGATTT
AAAATAGTTCCTCGACCTGATGAAGAGAAAGATGAAGAAATTAGAGGAGCTTGGACGGTG
GAGGTGAGCATGGAAATCCCGTTAGATAGGGGTCCCTTAAACCTACACCTGGGTTGCAAG
CCCCAGGCACTGTTGAAGCTCCTCTCCCTGCGACGCGATGGACCCGGCACCCGCACGGAC
AGAGATGCCTATCCTGCTCCACCGGCCCCAGCCGAGGCTCTCCGACCTCGTCCCCCCGTA
GTGTGTGTCATGGGTCATGTAGACCACGGCAAGACCACACTGCTCGACTCCCTCCGAGAC
ACCTCAGTGGTCGATTCTGAGTTTGGAGGCATCACTCAACACATTGGTGCATTTGAAGTG
AAGCTGTCTTCTGGTGATAGGGTGACGTTCTTGGATACGCCGGGACATGCGGCGTTCACG
GCGATGAGGTCCCGGGGCGCGCGGGGAGCGGATATAGTGGTGCTGGTGGTGGCCGGGGAC
GACGGGGTCATGGAGCAGACGGTGGAGAGCGTTCGAATGGCGAGGGAGGCGGACGTCCCG
ATCTTGGTGGCTATCAATAAGATGGACAAGCCGGGTGTTGACATTGAGAGGACTCTTCAC
TCGCTCGCTCAGCACGGTATAGTGTGTGAGGCGCTGGGTGGAGACGTGCAGGCTATACCG
ATATCGGCGCTGAAGAAACAGAACCTGGACACGTTGGTGGAAGCGCTCATCCTGCAGGCA
CAGCTCATGGAGCTGAAGGCGGACCCCGGGGGGCCAGTGGAGGGGGTCGTCATCGAGGCT
CTCGTGGACCCACGGACTGGTAAACAAGCGACGGTGTTGGTGCAGCGAGGGTGTCTGCGG
AGGGGAGCCGTGCTGGTGGCGGGCCAGGGGTGGGGGAAGGTACGCCTCCTACAAACGTCC
GAGGGCCTGCCCACTGATGTCGCTGCGCCCTCGACCCCTGTCCGCGTGCTCGGCTGGAGG
GAGATGCCCTCCGCAGGGGATTACGTCATTGAGGTCGATTCAGAGAAAAGAGCCAACGAG
GTTATGAGGTGGCGCAGCAACCAGCGCATGAAGGAAAAGCAAGCCGTCGACAGCGAAGCG
ATATCCGTGAAGGAAATCAGTCACCGCGAGGAGTACCAGAGACAGCTAGCGGCGAAGCGA
GCTCTGGGACGGATGAAGACGAGGCAGCAGGGACCGCGCCAGAAGATGATCCAGGACGAC
GGACATCCCGCCTTACACGTGCTCGTCAAAGGTGACGTGGACGGCTCTGTGGAGGCTTTG
CTTGACATTCTGGAGACTTACGACGAGAGTCGCGTGAAGATGGAACTGGTGCACTTCGGA
ATCGGACAAGTGACGCCCGGGGATATTGAGATAGCCGAGGCGTTCGGCGCTGTGATATAC
GCGTTCAACGTGGAGGTGCCGCCGTCTGTGGCCGTGGAAGCCAAAAATAATAACATACAA
ATAAAGAGACACAACGTTATATACAAACTGGTCGACGACATCAAGGACGAGATCAGCGCC
CGGATACCCACCACGCTCACCGAAGAAGTCGTGGGTGAAGCGAACGTTTTGCAGCAGTTC
CTGGTGGGTGAAGGTCGGCGGCGGGTGCCGGTCGCCGGCTGCCGCTGTGTGAGAGGCGTG
CTACAGCGAGCGGCGCTGTATAGACTTATAAGGGGACAGGAAATTGTTTATGAGGGTAGT
TTTTGTCCTGGTCACCTTAGCCAGTGTATCCAAAGAAATAAATATTTTCACCGACCATTA
GCGACATCTATCGCCCGAGTGATAGCCGAGGCGTTCGGCGCTGTGATATACGCGTTCAAC
GTGGAGGTGCCGCCGTCTGTCGCCGTGGAAGCCAAAAATAATAACATACAAATAAAGAGA
CACAATGTCATATACAAACTGGTCGACGACATCAAGGACGAGATCAGCGCCCGAATACCC
ACCACGCTCACCGAGGAAGTTGTGGGTGAAGCGAACGTTTTGCAGCAGTTCCTGGTGGGT
GAAGGTCGGCGGCGGGTGCCGGTCGCCGGCTGCCGCTGTGTGAGAGGCGTGCTACAGCGA
GCGGCGCTGTATAGACTTATAAGGGGACAGGAAATTGTTTATGAGGGTAAACTGGCTTCA
ATGAAACACCTCAAGGACGAAGTGACTACTATAAAGAGAGATATGGAGTGCGGGCTGAGG
TTGGAGGACCCGTCCATCACCATCCAGCCCGGAGACACCATCCAGTGTTATAAGATGGTG
GAAGAGACACACACCACCAGCTGGGACCCCGGCTTCTAG
Protein sequence:
MYRSVLFSRLFVRQYKNDLTQILESRKCFSNDFYNKKSFMRQISTSRITLKKRKSIEERH
IENQGRRVIRYSPKAGSEVVGIWKNMTVKEISDVLQKDVEHIYNALQFADKNSEVVYKED
TVIHNPQIVRDVVKISGYRFKIVPRPDEEKDEEIRGAWTVEVSMEIPLDRGPLNLHLGCK
PQALLKLLSLRRDGPGTRTDRDAYPAPPAPAEALRPRPPVVCVMGHVDHGKTTLLDSLRD
TSVVDSEFGGITQHIGAFEVKLSSGDRVTFLDTPGHAAFTAMRSRGARGADIVVLVVAGD
DGVMEQTVESVRMAREADVPILVAINKMDKPGVDIERTLHSLAQHGIVCEALGGDVQAIP
ISALKKQNLDTLVEALILQAQLMELKADPGGPVEGVVIEALVDPRTGKQATVLVQRGCLR
RGAVLVAGQGWGKVRLLQTSEGLPTDVAAPSTPVRVLGWREMPSAGDYVIEVDSEKRANE
VMRWRSNQRMKEKQAVDSEAISVKEISHREEYQRQLAAKRALGRMKTRQQGPRQKMIQDD
GHPALHVLVKGDVDGSVEALLDILETYDESRVKMELVHFGIGQVTPGDIEIAEAFGAVIY
AFNVEVPPSVAVEAKNNNIQIKRHNVIYKLVDDIKDEISARIPTTLTEEVVGEANVLQQF
LVGEGRRRVPVAGCRCVRGVLQRAALYRLIRGQEIVYEGSFCPGHLSQCIQRNKYFHRPL
ATSIARVIAEAFGAVIYAFNVEVPPSVAVEAKNNNIQIKRHNVIYKLVDDIKDEISARIP
TTLTEEVVGEANVLQQFLVGEGRRRVPVAGCRCVRGVLQRAALYRLIRGQEIVYEGKLAS
MKHLKDEVTTIKRDMECGLRLEDPSITIQPGDTIQCYKMVEETHTTSWDPGF