Genomic Position | scaffold4563:- 5543-7366 |
---|---|
See gene structure | |
CDS Length | 837 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 0 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (1e-67) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (9e-68) |
GeneOntology terms    | GO:0005198 structural molecule activity GO:0005916 fascia adherens GO:0005515 protein binding GO:0016337 cell-cell adhesion GO:0030027 lamellipodium GO:0003964 RNA-directed DNA polymerase activity GO:0015629 actin cytoskeleton GO:0045296 cadherin binding GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10020 |
Nucleotide sequence:
ATGATTGAAAAATTGCTGGGGAAAAAGAAGTCTGAGGGATGGCGTATGGTAAAATCTTGT
TCTGAAGTTCAGAAGCTGTCAGATAAAACTTCTCGTGGAGATAAAATACAGAACAGTGTT
AGCAGAATCAAGCTAGAGTCTAGAGGAGACGAAATCAAAATCGCCCGAGGCGTAAGGCAG
GGAGACCCTTTGTCTCCAAAATTGTTCATAGCCGTCTTGCAATGCATATTCTCCAAATGG
AACTGGACTTCTGAAGGTATCCCCATTAACAACGAACGCCTCACACATCTGAGATTTGCT
GACGACATCGTGATCTTTGCCGAAACTCCTAAGAAGTTAGAAAATATGATATCGCAACTA
AACATAGAGAGCAAATATGTTGGCCTGCATATGAACCTAAGCAAGACAAAAATAATGACA
AACAGTATGAGAGATAAAGTAATGCTTGATGGTGTCGAACTTGAATATGTGGAACAGTAC
GTATACCTAGACAAACAAGTATCGTTTGCTAGAACAAAAAATGAAGATGAGGTCAACAAA
AGAATAACCTGCAGTTGGATTAAATACTGGGTCCACAAGGAAATTCTAAAAGGTAAATAC
GACCTAAATATGAAAAAGACCATCAGGGATACTTGTGTTCTGCCCTGCTTGACTTATGGC
TCGCCAAAGTGGACGTTCACTAACAAAATATGTAACAAAATAAGAACTTGTCAGCGAGCA
ATGAAGAGGAGCATGCTTCACCTAAGAAAAAATCGAAAATCAAGAAGCCAAGAAATAAGA
AACAAGACTAAATTGACAGATGCCTTACACCAAATACTAAAATTGAAATGGAGCTAG
Protein sequence:
MIEKLLGKKKSEGWRMVKSCSEVQKLSDKTSRGDKIQNSVSRIKLESRGDEIKIARGVRQ
GDPLSPKLFIAVLQCIFSKWNWTSEGIPINNERLTHLRFADDIVIFAETPKKLENMISQL
NIESKYVGLHMNLSKTKIMTNSMRDKVMLDGVELEYVEQYVYLDKQVSFARTKNEDEVNK
RITCSWIKYWVHKEILKGKYDLNMKKTIRDTCVLPCLTYGSPKWTFTNKICNKIRTCQRA
MKRSMLHLRKNRKSRSQEIRNKTKLTDALHQILKLKWS