| New model in OGS2.0 | DPOGS211838 |
|---|---|
| Genomic Position | scaffold7379:- 180-821 |
| See gene structure | |
| CDS Length | 411 |
| Paired RNAseq reads | 66 |
| Single RNAseq reads | 942 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006022 (1e-30) |
| Best Drosophila hit | La autoantigen-like, isoform A (2e-19) |
| Best Human hit | lupus La protein (1e-22) |
| Best NR hit (blastp) | PREDICTED: putative Sjogren syndrome antigen B variant 2 [Taeniopygia guttata] (1e-23) |
| Best NR hit (blastx) | PREDICTED: putative Sjogren syndrome antigen B variant 2 [Taeniopygia guttata] (2e-22) |
| GeneOntology terms | GO:0005634 nucleus GO:0030529 ribonucleoprotein complex GO:0000166 nucleotide binding GO:0003723 RNA binding GO:0006396 RNA processing |
| InterPro families | IPR002344 Lupus La protein IPR006630 RNA-binding protein Lupus La IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGACTGAAGAAAAAGAGGTACAAGCTGAAAATAACGAGAGTCAAGATAAAGAAAATAAA
AATGAGGATGAACAAAACAAAAATGCAGAAGTTGACAGTATAGAAGAAAAATCTGAATTG
GACAGTAGTATAATTCGTCAAATCGAATACTATTTTGGTGACCTTAACCTACCAAGAGAC
AAATTTCTCAGAGAGCAAGTCAAGCTTGATGATGGCTGGGTGCCACTGGAAGTGTTGACT
AGATTTAACAGACTTGCAAAACTGACGACTGACATCGGAGTTATTGCAAATGCTATCAGC
AAGTCTACATCAGGTCTTCTAGAGGTATTTAATGAGACAAAACTTAGCATTCCATGGATT
CAATGTGCGGTGCTAGACCCATCACATTGCAGGGAGAGGAGCAGTGTTTGA
Protein sequence:
MTEEKEVQAENNESQDKENKNEDEQNKNAEVDSIEEKSELDSSIIRQIEYYFGDLNLPRD
KFLREQVKLDDGWVPLEVLTRFNRLAKLTTDIGVIANAISKSTSGLLEVFNETKLSIPWI
QCAVLDPSHCRERSSV