New model in OGS2.0 | DPOGS200786  |
---|---|
Genomic Position | scaffold3539:- 4439-11477 |
See gene structure | |
CDS Length | 783 |
Paired RNAseq reads   | 440 |
Single RNAseq reads   | 958 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012003 (2e-72) |
Best Drosophila hit   | hand (3e-16) |
Best Human hit | heart- and neural crest derivatives-expressed protein 2 (3e-16) |
Best NR hit (blastp)   | PREDICTED: similar to heart and neural crest derivatives expressed transcript 2 [Tribolium castaneum] (2e-31) |
Best NR hit (blastx)   | dhand, putative [Pediculus humanus corporis] (3e-26) |
GeneOntology terms    | GO:0048703 embryonic viscerocranium morphogenesis GO:0030878 thyroid gland development GO:0060047 heart contraction GO:0003007 heart morphogenesis GO:0010002 cardioblast differentiation GO:0030528 transcription regulator activity GO:0045449 regulation of transcription GO:0005634 nucleus GO:0006350 transcription GO:0003677 DNA binding GO:0007275 multicellular organismal development GO:0030859 polarized epithelial cell differentiation GO:0035051 cardiac cell differentiation |
InterPro families    | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain |
Orthology group | MCL12326 |
Nucleotide sequence:
ATGTCTAGTTATGGCAGCACCTCTCCTTCTGACGAGGGCTTCGACAGATATGAACCGCCC
TTCTACTGTCAGACATCACACCAAGGAAGTCCCATGGAGGGAGGCGTGTTCTGGTCCGGG
GCTGGCGAGAACCAGGAGTATGAGCACCAAGACGTGTACCACGACACAGGATACATCGGA
AGGAATTACGCGTACGAGGAAATGCAGATTTTGGGGAACGAACCCTACGATGTCTATCAT
AACACTATGATGCATCAAAACTACCCGCAAAATAACGGAGGCCTGGACTGTGACATGCAA
GCCATACCTCGTTACGACAGGCCGCCGCCGTCGTTCGTGAGAGTGGTGAAGAGGAGGACC
ACGGCCAACAAGAAGGAGAGGCGGAGGACGCAGAGCATCAACACGGCCTTCACCGACCTG
AGAGAGTGCATCCCCAACGTGCCGCCCGACACCAAGCTGTCCAAGATGGTGCGACCGAGA
TCGCAGAGCATCAATGTAGCGTTCTCGAAACTCAGAGATCGTATACCGAGCGTGCTCCCC
GACACTAAGATGACTAAGATCAAGACGCTCCGCCTGGCCACGTCGTACATCTCGTATCTG
CTCAAGGTGTTGGAGACTGACGGTGAACCCGCGGGAGGGTTCCGGGCGGAGCTGCACCAC
GCGCCGCCGAGGAGACGGGCCGCGGAGGCACAGAACGTCGAGAAGAAGGGTAAAGGTCGT
ACTGGATGGCCGCAACACGTCTGGGCGCTCGAACTAAAGAGCGAGAATAATTTGCAAACA
TAA
Protein sequence:
MSSYGSTSPSDEGFDRYEPPFYCQTSHQGSPMEGGVFWSGAGENQEYEHQDVYHDTGYIG
RNYAYEEMQILGNEPYDVYHNTMMHQNYPQNNGGLDCDMQAIPRYDRPPPSFVRVVKRRT
TANKKERRRTQSINTAFTDLRECIPNVPPDTKLSKMVRPRSQSINVAFSKLRDRIPSVLP
DTKMTKIKTLRLATSYISYLLKVLETDGEPAGGFRAELHHAPPRRRAAEAQNVEKKGKGR
TGWPQHVWALELKSENNLQT