| New model in OGS2.0 | DPOGS211285 |
|---|---|
| Genomic Position | scaffold2115:- 12195-19366 |
| See gene structure | |
| CDS Length | 1296 |
| Paired RNAseq reads | 1938 |
| Single RNAseq reads | 5839 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012503 (3e-40) |
| Best Drosophila hit | mushroom-body expressed, isoform D (5e-72) |
| Best Human hit | poly(rC)-binding protein 3 isoform 1 (4e-59) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP004942-PA [Tribolium castaneum] (6e-152) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC000237 [Tribolium castaneum] (9e-81) |
| GeneOntology terms | GO:0017130 poly(C) RNA binding GO:0005634 nucleus GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR004088 K Homology, type 1 IPR004087 K Homology IPR018111 K Homology, type 1, subgroup |
| Orthology group | MCL11843 |
Nucleotide sequence:
ATGCAGGGGAAGGAAGTTGGCAGTATTATTGGAAAGAAGGGGGAAATTGTCAAAAGATTC
AGAGAGGAGTCGGGTGCGAAAATCAACATATCAGATGGATCATGTCCAGAAAGAATTGTC
ACTGTCACGGGGAACACCAGTTCAATATTCAAAGCATTCACACTTATATGCAAAAAATTC
GAAGAGTGGTGCTCGCAGTTCAATGAGGGCGGTGGCGGATCCCGGGCTCCGATCACATTA
CGGCTTATCGTGCCAGCATCACAATGTGGTTCACTCATCGGCAAAGGCGGTTCTAAGATC
AAGGAGATCAGAGATGTTACCGGCCGCTTGTATGTCCATGTGGCAAGTGAGATGTTACCG
AACTCAACGGAGCGTGCGGTCACCATCAGTGGTACATGTGATGCGATCACACAATGCATC
TATCACATCTGCTGTGTAATGCTAGAGAGTCCTCCAAAAGGCGCGACAATCCCATACAGG
CCGAAGCCCAATGTAGCAGGTCCAGTGATACTGGCCGGTGGACAAGCTTACACCATACAA
GGAAACTATGCTGTGCCAGCACAAGATGCGGTGTGCGCGCCGGTGTTCCCGATGCTCGAG
GTGAAGCCGCCGCTAGTGGGAGCCTTGCCGCCGGCTCACCTCCTGCCGCCGCTGGACCAC
CACCTCATGGGCGGTTTGGCTAAATCACCACTGGCCGGCTTAGCAGCCCTAGGTCTCGGC
GGATTGGGACCCGCTAACACTGGCGGACTTAACCCAGCTGCGCTAGCAGCGCTGGCCGGT
TCTCAGTTGAGGTCGTCTAACACTGGCCGCAACCAACCGGCGACCAACCAACAGTCACAC
GAGATGACCGTGCCCAATGAACTTATCGGATGCATTATTGGAAAGGGAGGCACCAAAATA
GCTGAGATCCGTCAAATATCCGGCGCCATGATCCGGATATCGAACTGCGAGGAGCGCGAG
GGAGGCAGCACGGACCGCACAATCACCATATCAGGCAACCCGGACTCCGTGGCGTTGGCG
CAATACCTCATCAACATGAGTGTGGAGCTGCAGAAGGCGAATCTGGAGGGTGGCGGGTCA
GGGGGGCCCCTCGCGTCCGCTATCCCGCTGGCGCAGTTGCTCAGCAAGAGCGGGGCCCTG
GGGGCCCTCGGCTCGCTGTCCGCGCTCGGGGGCCTCACGGACCTCCTGGCGGGGGGGCCC
GTGCAAACGACCGGGGTACACCGCCCGCACAAGCTCACACGTCGCGACGACGACGCCAAA
GGATCCAAGGATAGAAACAAATATAGTCCCTACTAA
Protein sequence:
MQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGNTSSIFKAFTLICKKF
EEWCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRLYVHVASEMLP
NSTERAVTISGTCDAITQCIYHICCVMLESPPKGATIPYRPKPNVAGPVILAGGQAYTIQ
GNYAVPAQDAVCAPVFPMLEVKPPLVGALPPAHLLPPLDHHLMGGLAKSPLAGLAALGLG
GLGPANTGGLNPAALAALAGSQLRSSNTGRNQPATNQQSHEMTVPNELIGCIIGKGGTKI
AEIRQISGAMIRISNCEEREGGSTDRTITISGNPDSVALAQYLINMSVELQKANLEGGGS
GGPLASAIPLAQLLSKSGALGALGSLSALGGLTDLLAGGPVQTTGVHRPHKLTRRDDDAK
GSKDRNKYSPY