New model in OGS2.0 | DPOGS214614  |
---|---|
Genomic Position | scaffold4666:+ 1289-3626 |
See gene structure | |
CDS Length | 765 |
Paired RNAseq reads   | 20 |
Single RNAseq reads   | 124 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001681 (2e-11) |
Best Drosophila hit   | meiotic central spindle (4e-18) |
Best Human hit | Krueppel-related zinc finger protein 1 (1e-22) |
Best NR hit (blastp)   | novel zinc finger protein [Xenopus tropicalis] (3e-21) |
Best NR hit (blastx)   | hypothetical protein LOC548841 [Xenopus (Silurana) tropicalis] (3e-24) |
GeneOntology terms    | GO:0006355 regulation of transcription, DNA-dependent GO:0005622 intracellular GO:0007275 multicellular organismal development GO:0005634 nucleus GO:0046872 metal ion binding GO:0008270 zinc ion binding GO:0003677 DNA binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR022755 Zinc finger, double-stranded RNA binding IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | ND |
Nucleotide sequence:
ATGAGGCCCAAGCAGTCAATGCAATTTACCGTGAAACATCTATCATTGGATGAACAGAGA
GAGGAGATTGAATTGAAGAAGGGGTCGCCGGAATATACACAAAGGAATTATAAATGCAAG
GACTGTGGTCTGGGTTTTATTAGTGAAGATGTCTTGGAAGAGCACATCGTGAAGCATTCA
GAGTCTAATGGCGCGAATATGTGCGATGTATGCACATTACGATTCAAATCAAAGACGGTA
TTGACACAACACAAACTACTACACTCCCGCGTGTTTGTCTGTAATAAATGTGGTGTTCAT
ATAAAAAAGTGGTCTCACGCTCTCACACACAGACACAAGTGTTGGGACGTTTGTGTATCT
GTGTGCGTGTATTGTAAGAAAGTGTTCAAATCACACACTGGCTCTAAACCTTTCGTGTGT
GACTGCGGTCGTAAATTCACGACTAAATCGAATCTAAAGTCCCATCAAAACGTGCACAGC
AGTTCCAGAGAACATTACTGCGTTGAGTGCAACAGATATTACAAGACTGAGAGGGGCTTG
AAGAAACATTATAAGGACACGTTGAAGCACGGGGGATATGGCGCGATTCCTCGCTCTCAG
TGTGATGATAAATTTCATTCGGAGACCGCTGTCAGCTCGCATGTTCGAGTCAGACACTCC
ACGGAGTATACCTGCGGTGTGTGTAACAAGAATTATTCAAGCAACTCTAATCTTAGGAAA
CATCTCCGCAGCGTGCACAACCTGACAGATATAGATATTGCATAA
Protein sequence:
MRPKQSMQFTVKHLSLDEQREEIELKKGSPEYTQRNYKCKDCGLGFISEDVLEEHIVKHS
ESNGANMCDVCTLRFKSKTVLTQHKLLHSRVFVCNKCGVHIKKWSHALTHRHKCWDVCVS
VCVYCKKVFKSHTGSKPFVCDCGRKFTTKSNLKSHQNVHSSSREHYCVECNRYYKTERGL
KKHYKDTLKHGGYGAIPRSQCDDKFHSETAVSSHVRVRHSTEYTCGVCNKNYSSNSNLRK
HLRSVHNLTDIDIA