| New model in OGS2.0 | DPOGS211024 |
|---|---|
| Genomic Position | scaffold203:+ 70770-81589 |
| See gene structure | |
| CDS Length | 1131 |
| Paired RNAseq reads | 307 |
| Single RNAseq reads | 821 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006504 (1e-98) |
| Best Drosophila hit | CG31033, isoform D (4e-72) |
| Best Human hit | autophagy-related protein 16-1 isoform 2 (1e-45) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP002315-PA [Tribolium castaneum] (7e-109) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP002315-PA [Tribolium castaneum] (3e-103) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR013923 Autophagy-related protein 16 IPR019781 WD40 repeat, subgroup IPR015943 WD40/YVTN repeat-like-containing domain IPR019775 WD40 repeat, conserved site |
| Orthology group | MCL10460 |
Nucleotide sequence:
ATGGAAGGCGGTGAGTGGAGAAAAGACATAATAAATCAATTGCAATCACGAAACAAACGT
GAAACCAGCACATTTCAGGACATCATAGCGTTTCAAAGCAGACTCTTTGACAATGTTAGT
ACCCTGAAAAATGAAAATCTACAGTTGACATTGATGAATGAGAGAATGCGATATTCTAAC
AATGAGAGTGTTTCAAGTGGAGGAAATCCTTCATTTGAGAAAATACAAGCTATGGAACAA
AGGATTCTAGCTCAACAGGAAGAATTGACTTCATTGCACAGAACAAGAGGTGAAAATGCA
CAGGAGATAATAAACCTTAATGCGAGGGTGCGGGAATTGGAAAAAAGTTTACAATCAAAG
GATATACTAATTTCAGAAAATATGGCACTAATAGCTTCACTACGAGCTGAAATACAGATG
TATGATACAAATATGAATGAACTACAAGGCTTGAATCAAATGTTGAGAGACGAACATCAA
GCACTGCAGATTGCATTTGCTTCGATAGAGGAAAAATTGAGGAAAGCTCAGGATGAAAAC
CGTTCGCTCGTCGAGAGACTTATTAAGTACAAAGCCAAAGATGCCGATAAAATGAATGAA
GAGAACGAACATTTCCTAAAGTCAAACAACCCTACTGCGTTTTTCATCAACACGTTTGGT
AGAGTTAGTTTCGGAAAAAAAAGTGACAAAGTTCGCAAAGAGTTAGAAGAAGCGGCTAGA
GAAGGTTGCAGTCGGGGTAGTGACGGTTCGGGCGGTAGCGTTGATGACAAGATAATGGAT
TCAATGCCATACTACGCAACCACTTTACCCACTAAAGTTTTATCAAGTTTTGACGCTCAC
GACGGCGAGGTGAATGCCGTCAAATGGAGTCCTACTGACCGCTTAGTGGCGACCGGTGGA
GCGGATAGGAAAGTTAAATTATGGGATGTCTCTAAAATGGGTCTGGTAGAAAACAAGGGT
GCGTTGGTGGGTTCGAATGCTGGTGTGATGTCTGTTGACTTTGATGCCACCGGCGTCTAC
ATAGTTGGGGCCTCGAACGACTTCGCGAGTCGCGTGTGGACTGTCGGGGACCAACGGCTA
AGGACACCATCAACTTACAAACCTATATACGCCACAAAACCGGTGAATTAA
Protein sequence:
MEGGEWRKDIINQLQSRNKRETSTFQDIIAFQSRLFDNVSTLKNENLQLTLMNERMRYSN
NESVSSGGNPSFEKIQAMEQRILAQQEELTSLHRTRGENAQEIINLNARVRELEKSLQSK
DILISENMALIASLRAEIQMYDTNMNELQGLNQMLRDEHQALQIAFASIEEKLRKAQDEN
RSLVERLIKYKAKDADKMNEENEHFLKSNNPTAFFINTFGRVSFGKKSDKVRKELEEAAR
EGCSRGSDGSGGSVDDKIMDSMPYYATTLPTKVLSSFDAHDGEVNAVKWSPTDRLVATGG
ADRKVKLWDVSKMGLVENKGALVGSNAGVMSVDFDATGVYIVGASNDFASRVWTVGDQRL
RTPSTYKPIYATKPVN