MonarchBase - Protein-coding gene

DPOGS200058
Transcript	DPOGS200058-TA	756 bp
Protein	DPOGS200058-PA	251 aa
Genomic position	DPSCF300044 - 1016073-1018907
RNAseq coverage	54x (Rank: top 69%)

Annotation
*Heliconius*	HMEL016164	1e-34	40.00%
*Bombyx*	BGIBMGA002401-TA	2e-35	40.86%
*Drosophila*	qm-PB	3e-39	43.82%
EBI UniRef50	UniRef50_A1IIW7	2e-30	38.07%	Geranylgeranyl diphosphate synthase-3-B-isoform n=6 Tax=Nasutitermes takasagoensis RepID=A1IIW7_9NEOP
NCBI RefSeq	XP_308860.3	6e-39	42.93%	AGAP006894-PA [Anopheles gambiae str. PEST]
NCBI nr blastp	gi\|158286675	1e-37	42.93%	AGAP006894-PA [Anopheles gambiae str. PEST]
NCBI nr blastx	gi\|158286675	1e-36	44.38%	AGAP006894-PA [Anopheles gambiae str. PEST]

Group
Gene Ontology	GO:0008299	1.9e-12	isoprenoid biosynthetic process
KEGG pathway	aga:AgaP_AGAP006894	2e-38
	K00804 (GGPS1)	maps->	Terpenoid backbone biosynthesis
InterPro domain	[29-190] IPR017446	1.1e-32	Polyprenyl synthetase-related
	[14-190] IPR008949	3.6e-25	Terpenoid synthase
	[30-177] IPR000092	1.9e-12	Polyprenyl synthetase
Orthology group

Nucleotide sequence:

>DPOGS200058-TA
ATGGCCAAGGAGGTCGGAAATGAGAACATTAATCTGGATGAAGGAGCCGAAATAATCGCAAAGCAGTTTATAGATGCCCTTACCGGCCAGGGCTATGAGATCTACTGGCGTGACAATTGCGTCTGTCCTGATGAGAAGACATATCTTAAGATGCTTACTCTAAAAACTGGTACTATGCTTTTACTTGGAGTAAAAATGATCCAGCTGTTCAGTGAAAATAAGACAAAGTACGACGATTTTGTTATGAAACTTGGGCTTTATCTCCAACTAAGGGATGACTATTGCAATATGGGACATGAGAAGGATTTAGAAGAAATGCCAGGAGAGGAAGACGTCAATGCTGACAAAGATGGGTATATCCTAGAAGATATAACAGAGGGCAAGTTTACCTTGCCTGCGATATATGCCATGAAGACTCCAGAAGGACCGCAAGTGTTAAGCATAATTCGTCAGCGCACCAGAGATCTGGAGCTGAAGAAGTTGTGTTTGTCTCTGCTGGAGAAGTCTGGAGGTATGCAGTATACTAGGGATCTTTTAATGAAGATCGACAAGGAATTGCGTACTGAGGTACTGCCCATCATCGAGCCTATTTTTTGCCCGAAATTCGCCAGTTTCGGGAAACCTTCAGCGAGGAGCTTAAAAAATCAATTCTTGTTTCTGTTCTGTCCTTGTAAAAGGGGTCTGATGGCAGATCACACAGTTCCAGTTGATAATCAAACTTCACACTCTGAACTGCGAACGATAATGAATGAGTGA

Protein sequence:

>DPOGS200058-PA
MAKEVGNENINLDEGAEIIAKQFIDALTGQGYEIYWRDNCVCPDEKTYLKMLTLKTGTMLLLGVKMIQLFSENKTKYDDFVMKLGLYLQLRDDYCNMGHEKDLEEMPGEEDVNADKDGYILEDITEGKFTLPAIYAMKTPEGPQVLSIIRQRTRDLELKKLCLSLLEKSGGMQYTRDLLMKIDKELRTEVLPIIEPIFCPKFASFGKPSARSLKNQFLFLFCPCKRGLMADHTVPVDNQTSHSELRTIMNE-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: