DPOGS200072 | ||
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Transcript | DPOGS200072-TA | 627 bp |
Protein | DPOGS200072-PA | 208 aa |
Genomic position | DPSCF300044 - 454059-454685 | |
RNAseq coverage | 16x (Rank: top 81%) |
Annotation | ||||
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Heliconius | HMEL004320 | 2e-120 | 96.63% |   |
Bombyx | BGIBMGA004593-TA | 6e-114 | 92.31% |   |
Drosophila | erm-PA | 4e-83 | 84.47% |   |
EBI UniRef50 | UniRef50_Q9VQ56 | 5e-81 | 84.47% | CG31670 n=28 Tax=Bilateria RepID=Q9VQ56_DROME |
NCBI RefSeq | XP_001356940.2 | 2e-82 | 88.31% | GA16381 [Drosophila pseudoobscura pseudoobscura] |
NCBI nr blastp | gi|198475144 | 3e-81 | 88.31% | GA16381 [Drosophila pseudoobscura pseudoobscura] |
NCBI nr blastx | gi|300433308 | 3e-85 | 77.01% | Fez family zinc finger protein [Branchiostoma lanceolatum] |
Group | ||||
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Gene Ontology | GO:0003676 | 3.6e-13 | nucleic acid binding | |
GO:0008270 | 8.7e-05 | zinc ion binding | ||
GO:0005622 | 8.7e-05 | intracellular | ||
KEGG pathway |   | |||
InterPro domain | [56-84] IPR013087 | 3.6e-13 | Zinc finger, C2H2-type/integrase, DNA-binding | |
Orthology group | MCL13219 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200072-TA
ATGCCCGTCCACACGGGGGCCAGGCCCTTCGTCTGCAAGATCTGCGGTAAAGGCTTCCGACAGGCCTCGACATTATGCCGCCACAAAATTATACATACATCCGAGAAACCGCACAAATGTCTCACATGCGGAAAGGCATTCAACCGCTCGTCGACGCTGAACACCCACGCAAGAATACACGCCGGCTACAAGCCCTTCGTATGCGAGTTCTGCGGCAAGGGATTTCATCAGAAGGGCAATTACAAGAATCATAGATTGACGCATAGCGGTGAGAAAGCTTATAAATGCAATATATGTAACAAAGCCTTCCACCAGATATACAACCTGACATTCCATATGCACACACACAACGAGCGGAAGCCGTTCACTTGCAGTATATGCGCTAAAGGGTTCTGCAGGAATTTCGATCTCAAAAAGCACACGAGGAAATTGCACATGGGTGCTGGTAGTACTAATAATGATTCTTCTCTGGACACGCAGGACGAGTCGACCCAAGAGGCGACGGCTAGTCCAGGGGAAGAGACGAGAAGAGCAGCCTTCAGACCCTTCCTCGGAACAGCCTACCCAAGAATCCTGGACCCCACCCGGATGACCGCCCCCAATACATTCTTCTCCAAACTCTTGTGA
>DPOGS200072-PA
MPVHTGARPFVCKICGKGFRQASTLCRHKIIHTSEKPHKCLTCGKAFNRSSTLNTHARIHAGYKPFVCEFCGKGFHQKGNYKNHRLTHSGEKAYKCNICNKAFHQIYNLTFHMHTHNERKPFTCSICAKGFCRNFDLKKHTRKLHMGAGSTNNDSSLDTQDESTQEATASPGEETRRAAFRPFLGTAYPRILDPTRMTAPNTFFSKLL-