Monarch geneset OGS2.0

DPOGS200124
TranscriptDPOGS200124-TA639 bp
ProteinDPOGS200124-PA212 aa
Genomic positionDPSCF300044 + 985518-986931
RNAseq coverage259x (Rank: top 41%)
Annotation
HeliconiusHMEL0154843e-5548.10% 
BombyxBGIBMGA002401-TA1e-5045.96% 
Drosophilaqm-PB1e-4944.29% 
EBI UniRef50UniRef50_O957495e-4646.67%Geranylgeranyl pyrophosphate synthase n=73 Tax=Eukaryota RepID=GGPPS_HUMAN
NCBI RefSeqXP_001605679.17e-5047.37%PREDICTED: similar to ENSANGP00000021639 [Nasonia vitripennis]
NCBI nr blastpgi|1565547591e-4847.37%PREDICTED: geranylgeranyl pyrophosphate synthase-like [Nasonia vitripennis]
NCBI nr blastxgi|1565547593e-4747.55%PREDICTED: geranylgeranyl pyrophosphate synthase-like [Nasonia vitripennis]
Group
Gene OntologyGO:00082995.9e-25isoprenoid biosynthetic process
KEGG pathwaynvi:1001220742e-49 
 K00804 (GGPS1)maps-> Terpenoid backbone biosynthesis
InterPro domain[8-197] IPR0174461.5e-60Polyprenyl synthetase-related
[8-195] IPR0089493.3e-41Terpenoid synthase
[19-194] IPR0000925.9e-25Polyprenyl synthetase
Orthology group 
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200124-TA
ATGGACTGTGAAAAAAATCTAGAAAAGGAGCTTCTTGCACCCTACATGCATTTGCTGCAAGTTAAAAGCAAGCAGTTTCGGAATAAAATCGTATTGGCCTTCAATTACTGGTTCAAGGTACCAGACGATCTAGTTCAAAATGCACTCAATGCGATGACAATGACATACAACGCAAGTTTATTGATCGATGATATTCAAGATAATTCAATAAAACGTCGAGGGATTGAAGCAGCTCATTGTATTTATGGAATTCCATTAACTATTAATACAGCAGTTCATGTTTTGGTTCTGGCCCTAAAACAAGAATTAGACCTCGTACCAGCCGCATTGGGTGGTAAAATATTTGTTGACCACGTTCTGGATGTAATTTACGGCCAAGGTGTTGAAATTTACTGGCGAGACAACTTTATGTGTCCGTCTGAAAAAGAGTATAAAGAAATGGTCCAGCAAAAAACTGGTGCCATGCTTTTATATGGAGTGAAATTAATACAAGTTTTAAGTGATGACAAAAGAAATTACGACGATTTTGTGAAACTTCTTGGTTTTTATTTCCAATTGAGAGACGACTACTGCAATTTAAAACAACTAGAAGCATTAGAGGAATACCCTGAAAAGGAAGATGAAAGTGTATGTGTCTGA

Protein sequence:

>DPOGS200124-PA
MDCEKNLEKELLAPYMHLLQVKSKQFRNKIVLAFNYWFKVPDDLVQNALNAMTMTYNASLLIDDIQDNSIKRRGIEAAHCIYGIPLTINTAVHVLVLALKQELDLVPAALGGKIFVDHVLDVIYGQGVEIYWRDNFMCPSEKEYKEMVQQKTGAMLLYGVKLIQVLSDDKRNYDDFVKLLGFYFQLRDDYCNLKQLEALEEYPEKEDESVCV-