DPOGS200165 | ||
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Transcript | DPOGS200165-TA | 597 bp |
Protein | DPOGS200165-PA | 198 aa |
Genomic position | DPSCF300128 + 327586-328182 | |
RNAseq coverage | 221x (Rank: top 45%) |
Annotation | ||||
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Heliconius | HMEL006880 | 2e-101 | 97.98% |   |
Bombyx | BGIBMGA002917-TA | 2e-101 | 97.98% |   |
Drosophila | veli-PC | 5e-84 | 71.02% |   |
EBI UniRef50 | UniRef50_Q6NL82 | 2e-81 | 70.61% | RE51991p n=4 Tax=Endopterygota RepID=Q6NL82_DROME |
NCBI RefSeq | XP_315884.3 | 3e-93 | 90.86% | AGAP005858-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|158294891 | 5e-92 | 90.86% | AGAP005858-PA [Anopheles gambiae str. PEST] |
NCBI nr blastx | gi|158294891 | 6e-96 | 90.86% | AGAP005858-PA [Anopheles gambiae str. PEST] |
Group | ||||
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Gene Ontology | GO:0005515 | 4.7e-28 | protein binding | |
KEGG pathway |   | |||
InterPro domain | [1-199] IPR017365 | 7.8e-132 | Lin-7 homologue | |
[72-191] IPR001478 | 4.7e-28 | PDZ/DHR/GLGF | ||
[14-66] IPR014775 | 2.4e-17 | L27, C-terminal | ||
[13-68] IPR004172 | 3.4e-10 | L27 | ||
Orthology group | MCL12384 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200165-TA
ATGACGAGCACTGCGGAACAGCTGACGTTAGCAAGAGACATAAAGAGAGCCATCGAGTTGCTAGAAAAACTCCAGCAAAGTGGAGAAGTTCCTGCGACTAAACTGGCTGCACTTCAAAAAGTGTTACAAAGTGATTTTTTAAATGCTGTGAGAGAAGTGTATGAACATGTTTACGAAACGGTGGATATTCAGGGTTCGGCGGATATACGAGCATCGGCTACTGCCAAAGCTACCGTCGCTGCGTTTGCTGCAGCAGAAGGTCACGCTCATCCCAGAGTTGTGGAGTTACCGAAAACCGAAGAAGGCTTAGGTTTTAACGTCATGGGTGGCAAGGAACAAAATTCGCCAATTTATATATCCAGAATCATACCTGGCGGTGTCGCTGACCGTCATGGAGGATTGAAAAGAGGTGACCAACTGCTCTCAGTTAATGGAGTATCCGTAGAGGGAGAAAACCATGAAAAGGCTGTAGAACTGCTTAAGCAGGCAGTGGGTTCTGTCAAACTAGTGGTAAGATACACACCAAAGGTATTAGAAGAAATGGAAATGAGGTTTGATAAGCAAAGAACGGCGCGACGGCGTCCAAATTACAACTAA
>DPOGS200165-PA
MTSTAEQLTLARDIKRAIELLEKLQQSGEVPATKLAALQKVLQSDFLNAVREVYEHVYETVDIQGSADIRASATAKATVAAFAAAEGHAHPRVVELPKTEEGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVNGVSVEGENHEKAVELLKQAVGSVKLVVRYTPKVLEEMEMRFDKQRTARRRPNYN-