DPOGS200209 | ||
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Transcript | DPOGS200209-TA | 639 bp |
Protein | DPOGS200209-PA | 212 aa |
Genomic position | DPSCF300093 + 489772-492781 | |
RNAseq coverage | 0x (Rank: top 95%) |
Annotation | ||||
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Heliconius | % |   | ||
Bombyx | % |   | ||
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_D7F179 | 4e-40 | 60.14% | Endonuclease-reverse transcriptase n=3 Tax=Obtectomera RepID=D7F179_BOMMO |
NCBI RefSeq | XP_001187905.1 | 2e-23 | 45.16% | PREDICTED: similar to protein F28E10.3 [imported] - Caenorhabditis elegans [Strongylocentrotus purpuratus] |
NCBI nr blastp | gi|298204367 | 1e-39 | 60.14% | endonuclease-reverse transcriptase [Bombyx mori] |
NCBI nr blastx | gi|298204367 | 9e-38 | 60.58% | endonuclease-reverse transcriptase [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0003964 | 8.4e-12 | RNA-directed DNA polymerase activity | |
GO:0003723 | 8.4e-12 | RNA binding | ||
GO:0006278 | 8.4e-12 | RNA-dependent DNA replication | ||
KEGG pathway |   | |||
InterPro domain | [75-199] IPR000477 | 8.4e-12 | Reverse transcriptase | |
Orthology group | MCL27789 |   | Specific divergent |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200209-TA
ATGAACTTTAAAGTCAAAGACGTTGAAGCCATACCTGAAATTTTAGGATCGGAAATGGAACAAGTAGACAGAAGCAGTGAAGTAGGTCTAGAAATAAACACTAGCAATACTAAAGTGATGACCAACTCAACACCCACAGACATAACAGTCAACAGACAGAAACTCGAATATGTATACCTAGGCCAGATAATATCGCAAAAGGACCAAATGTCCATAGAAATAGCGAAAATAAAACTAGAATCTACAGGAGATGCTTTCACAATTAAAAGGGGAGACAGGCAAGGTGACCCACTCTCACCAAAGCTGTTTACAGCCCTACTAGAACAAATGTTTAGAAAACTGAATTGGGAAAATCAAGGGCTAAACATAAATGGTGCACGATTGAGCCATCAAAGAGTCGCAGACGACCTTGTCATATTAGAATCGAATCCACTAACACTAGAATCAATGATACAAACCCTAGTAGACAGAAGCAGTGAAGTATGTCTAGAAATAATCACTAGCAAAACTAAAGGGATGACCAACTCAACACCCACAGACATAACAATCAACAGACAGAAACTCGAATATGTAGAGGAATATGTTTACCTAGGCCACATAATATTGCAAAAAGACCAAATGTCCATAGAAATAGTTTAA
>DPOGS200209-PA
MNFKVKDVEAIPEILGSEMEQVDRSSEVGLEINTSNTKVMTNSTPTDITVNRQKLEYVYLGQIISQKDQMSIEIAKIKLESTGDAFTIKRGDRQGDPLSPKLFTALLEQMFRKLNWENQGLNINGARLSHQRVADDLVILESNPLTLESMIQTLVDRSSEVCLEIITSKTKGMTNSTPTDITINRQKLEYVEEYVYLGHIILQKDQMSIEIV-