DPOGS200260 | ||
---|---|---|
Transcript | DPOGS200260-TA | 717 bp |
Protein | DPOGS200260-PA | 238 aa |
Genomic position | DPSCF300026 - 1124667-1125800 | |
RNAseq coverage | 248x (Rank: top 42%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL005384 | 5e-113 | 87.85% |   |
Bombyx | % |   | ||
Drosophila | mRpS7-PA | 6e-58 | 53.27% |   |
EBI UniRef50 | UniRef50_Q7Q1V7 | 5e-70 | 62.07% | AGAP009613-PA n=4 Tax=Endopterygota RepID=Q7Q1V7_ANOGA |
NCBI RefSeq | XP_001649336.1 | 5e-72 | 59.91% | mitochondrial ribosomal protein S7 [Aedes aegypti] |
NCBI nr blastp | gi|312381617 | 5e-74 | 65.67% | hypothetical protein AND_06035 [Anopheles darlingi] |
NCBI nr blastx | gi|312381617 | 1e-72 | 65.67% | hypothetical protein AND_06035 [Anopheles darlingi] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005840 | 1.4e-63 | ribosome | |
GO:0006412 | 1.4e-63 | translation | ||
GO:0005622 | 1.4e-63 | intracellular | ||
GO:0003735 | 1.4e-63 | structural constituent of ribosome | ||
KEGG pathway | cob:COB47_0737 | 5e-27 |   | |
  | K02992 (RP-S7, rpsG) | maps-> | Ribosome | |
InterPro domain | [65-238] IPR000235 | 1.4e-63 | Ribosomal protein S7 | |
[78-237] IPR023798 | 2.9e-44 | Ribosomal protein S7 domain | ||
Orthology group | MCL16101 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS200260-TA
ATGAATAATATAAGGATAGCTTTAAGAGAAGTTATACCAAATAGACTTCGGACTACATATAGAAATCAATGGCCAAACTTAACGCAGTCCAGATTTTATCCCCGAGCCACGAGCTTTCCAGATTATTTTCAAAACCCAATATTTAGAAAAGAGGATCAAGCAAAATTGATAGAAAATAATGAATTGACTAAGCTGGCCGCGGTCCCTGTGAAACCACCTGCTGCTTATGAGACATCCTCAGTGTACCATGATGCACTTGTGGATAAAGTTATCAACCATGTAATGAAAATGGGCAACAAACAATTGGCTCGCAGTCTTGTTGAAAAAGCATTTGAGAACATCAAAAGGAAACAGATAGAGAGATATCATCTAGCTTCAACGCCTGAAGACAAGGCGAAAATTCTGTTGAACCCTAAAGATGTTTTACACAGAGCTGTTGAAAACTGTAAACCGCTGTTACAACTTTTACCAATTAAAAGAGGAGGTATCACATACCAGGTGCCAGGACCTATAACTGAGAAAAGGTCTCTATTTTTGGCTGTCAAATGGTTGTTAGATGCTTCAAATGACAAAGAAAGAACAGTACATTTTCCTGAACAATTTGCTTGGGAACTCCTTGATGCGGCTAACAATACAGGAAAGGTTGTGAAGAGAAAGCAGGACCTCCACCGTCTTTGTGAAGCCAACAGGGCTTATGCACATTATAGATGGCAATAA
>DPOGS200260-PA
MNNIRIALREVIPNRLRTTYRNQWPNLTQSRFYPRATSFPDYFQNPIFRKEDQAKLIENNELTKLAAVPVKPPAAYETSSVYHDALVDKVINHVMKMGNKQLARSLVEKAFENIKRKQIERYHLASTPEDKAKILLNPKDVLHRAVENCKPLLQLLPIKRGGITYQVPGPITEKRSLFLAVKWLLDASNDKERTVHFPEQFAWELLDAANNTGKVVKRKQDLHRLCEANRAYAHYRWQ-