| DPOGS200276 | ||
|---|---|---|
| Transcript | DPOGS200276-TA | 411 bp |
| Protein | DPOGS200276-PA | 136 aa |
| Genomic position | DPSCF300026 - 848657-849155 | |
| RNAseq coverage | 7890x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL000014 | 1e-74 | 100.00% | |
| Bombyx | BGIBMGA005550-TA | 1e-74 | 100.00% | |
| Drosophila | His3.3A-PA | 1e-74 | 100.00% | |
| EBI UniRef50 | UniRef50_P84243 | 2e-72 | 100.00% | Histone H3.3 n=3487 Tax=root RepID=H33_HUMAN |
| NCBI RefSeq | XP_001608164.1 | 2e-73 | 100.00% | PREDICTED: hypothetical protein isoform 1 [Nasonia vitripennis] |
| NCBI nr blastp | gi|4504279 | 6e-72 | 100.00% | histone H3.3 [Homo sapiens] |
| NCBI nr blastx | gi|334359125 | 3e-69 | 100.00% | Chain E, The Human Nucleosome Structure Containing The Histone Variant H3.3 |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 1.1e-143 | DNA binding | |
| GO:0006334 | 1.1e-143 | nucleosome assembly | ||
| GO:0000786 | 1.1e-143 | nucleosome | ||
| KEGG pathway | nvi:100117018 | 7e-73 | ||
| K11253 (H3) | maps-> | Systemic lupus erythematosus | ||
| InterPro domain | [1-136] IPR000164 | 1.1e-143 | Histone H3 | |
| [2-136] IPR009072 | 1.5e-81 | Histone-fold | ||
| [58-132] IPR007125 | 8.3e-33 | Histone core | ||
| Orthology group | MCL10413 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200276-TA
ATGGCTCGTACCAAGCAGACAGCTCGTAAATCTACGGGAGGTAAAGCTCCCCGAAAACAGCTTGCCACAAAAGCGGCGCGTAAATCAGCTCCCAGTACTGGTGGAGTGAAAAAACCACATCGTTATCGCCCTGGTACCGTGGCCCTTCGAGAAATTCGTCGTTACCAAAAGTCCACTGAATTGTTGATTCGTAAACTGCCGTTCCAGCGTCTCGTAAGAGAAATAGCTCAGGATTTCAAAACTGACCTTCGTTTCCAATCTGCCGCTATTGGTGCATTGCAGGAAGCCAGTGAAGCCTACCTTGTAGGTCTCTTTGAAGACACCAATTTGTGCGCTATCCACGCCAAGCGTGTAACCATCATGCCTAAAGATATCCAACTGGCCAGACGGATTCGTGGGGAGCGAGCATAA
>DPOGS200276-PA
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA-