DPOGS200292 | ||
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Transcript | DPOGS200292-TA | 270 bp |
Protein | DPOGS200292-PA | 89 aa |
Genomic position | DPSCF300026 - 519484-520060 | |
RNAseq coverage | 123x (Rank: top 57%) |
Annotation | ||||
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Heliconius | HMEL000046 | 1e-45 | 91.01% |   |
Bombyx | BGIBMGA005565-TA | 2e-31 | 89.39% |   |
Drosophila | CG12659-PB | 2e-21 | 48.31% |   |
EBI UniRef50 | UniRef50_UPI000051A8A7 | 1e-32 | 75.00% | UPI000051A8A7 related cluster n=1 Tax=unknown RepID=UPI000051A8A7 |
NCBI RefSeq | XP_624857.2 | 3e-33 | 75.00% | PREDICTED: similar to CG12659-PB [Apis mellifera] |
NCBI nr blastp | gi|261335955 | 1e-42 | 91.01% | similar to CG12659 [Heliconius melpomene] |
NCBI nr blastx | gi|261335955 | 4e-42 | 91.01% | similar to CG12659 [Heliconius melpomene] |
Group | ||||
---|---|---|---|---|
KEGG pathway |   | |||
InterPro domain | [38-67] IPR013272 | 2.5e-10 | YL1 nuclear, C-terminal | |
Orthology group | MCL16454 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200292-TA
ATGTGGAGATCGCTAAAGCAAATATTAACTACCGAACGAACACTACCTTGGCCTGAAGAAGCTGTTTTGTACTATTCAATTAATGCTCCACCCACTTTTAAACCCACAAAGAAATATTCTGATATATCTGGTCTTCCAGCACCCTATATAGACAGACATTCCAAACTTTTCTATAGCAATGCCGAAGAGTTTGCTACAGTGAGGAGTTTACCCATGGATATAACAGCTGGCTACCTTCAACTTCGAGGAGCGAGTACAATAGTCGGTTGA
>DPOGS200292-PA
MWRSLKQILTTERTLPWPEEAVLYYSINAPPTFKPTKKYSDISGLPAPYIDRHSKLFYSNAEEFATVRSLPMDITAGYLQLRGASTIVG-