| DPOGS200315 | ||
|---|---|---|
| Transcript | DPOGS200315-TA | 504 bp |
| Protein | DPOGS200315-PA | 167 aa |
| Genomic position | DPSCF300026 + 29241-30419 | |
| RNAseq coverage | 20x (Rank: top 79%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017470 | 1e-54 | 55.42% | |
| Bombyx | BGIBMGA005612-TA | 4e-47 | 50.30% | |
| Drosophila | glob1-PD | 1e-12 | 27.89% | |
| EBI UniRef50 | UniRef50_B6ZIV8 | 5e-45 | 50.30% | Globin n=3 Tax=Obtectomera RepID=B6ZIV8_BOMMO |
| NCBI RefSeq | NP_001136083.1 | 1e-45 | 50.30% | globin 1 [Bombyx mori] |
| NCBI nr blastp | gi|215764931 | 3e-50 | 56.29% | globin [Samia cynthia ricini] |
| NCBI nr blastx | gi|215764931 | 2e-48 | 56.29% | globin [Samia cynthia ricini] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0015671 | 9.7e-37 | oxygen transport | |
| GO:0020037 | 9.7e-37 | heme binding | ||
| GO:0005506 | 9.7e-37 | iron ion binding | ||
| GO:0019825 | 9.7e-37 | oxygen binding | ||
| GO:0005576 | 5e-05 | extracellular region | ||
| GO:0005833 | 5e-05 | hemoglobin complex | ||
| KEGG pathway | ||||
| InterPro domain | [22-166] IPR012292 | 9.7e-37 | Globin | |
| [22-167] IPR009050 | 2.7e-34 | Globin-like | ||
| [28-133] IPR000971 | 6.9e-24 | Globin, subset | ||
| Orthology group | MCL14709 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200315-TA
ATGGGTGGGATCGTGAGTCGGATCTGGTGGGGTGGCGTTCCGGATGCCGTACAGGCGTACTCTGGCTTATCTCACCGAGATATATACACAGTGCAGAAGACTTGGGCGGTAGTATATTGCAATGCAGCTGAGAACGGCATTGAAATATTCAAAAGGCTATTTCATGCGAATCCAGAAACGAAAAATTTTTTTATAAACTTTCGGAACCTTAGCGATGAAGAGTTGGATAAGAGTCACCAATTCAGGGCTCACGTCATCAATTTGATGTCGTCTTTGAACCTGGCGATCACCAATCTTCACCAGCCGGAGGTGACCGCCGCGCTGATGAACAAGCTGGGAGAATCCCATGGAAAGAGAGGCATACGAGAGGAACACTTACTTAGCCTCAAAGATGTGATGCTGGAGATGCTCAATAGCCTTCTAGGGCTTGACGAGTCGGCACTTGTGTCTTGGAATAAGACAATAGATTTTATATACAAACATATATTTCAAACTTTACATTGA
>DPOGS200315-PA
MGGIVSRIWWGGVPDAVQAYSGLSHRDIYTVQKTWAVVYCNAAENGIEIFKRLFHANPETKNFFINFRNLSDEELDKSHQFRAHVINLMSSLNLAITNLHQPEVTAALMNKLGESHGKRGIREEHLLSLKDVMLEMLNSLLGLDESALVSWNKTIDFIYKHIFQTLH-