MonarchBase - Protein-coding gene

DPOGS200328
Transcript	DPOGS200328-TA	1131 bp
Protein	DPOGS200328-PA	376 aa
Genomic position	DPSCF300026 + 277364-278586
RNAseq coverage	7994x (Rank: top 2%)

Annotation
*Heliconius*	HMEL002915	100.00%
*Bombyx*	BGIBMGA013945-TA	96.81%
*Drosophila*	Act5C-PB	100.00%
EBI UniRef50	UniRef50_P63267	94.15%	Actin, gamma-enteric smooth muscle n=867 Tax=root RepID=ACTH_HUMAN
NCBI RefSeq	XP_002064370.1	100.00%	GK20124 [Drosophila willistoni]
NCBI nr blastp	gi\|17530805	100.00%	actin 5C, isoform B [Drosophila melanogaster]
NCBI nr blastx	gi\|17530805	100.00%	actin 5C, isoform B [Drosophila melanogaster]

Nucleotide sequence:

>DPOGS200328-TA
ATGTGCGACGAAGAAGTAGCCGCGTTGGTAGTGGACAATGGCTCCGGTATGTGCAAGGCCGGGTTCGCGGGAGACGATGCCCCTCGTGCCGTCTTCCCGTCGATCGTGGGCCGCCCTCGTCACCAGGGCGTGATGGTCGGTATGGGTCAGAAGGACTCGTACGTCGGAGACGAGGCCCAGAGCAAGAGAGGTATCCTCACCCTGAAGTACCCCATCGAGCACGGCATCGTCACCAACTGGGATGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAACTGCGTGTGGCCCCCGAAGAGCACCCCGTCCTGCTCACAGAGGCTCCCCTCAACCCTAAAGCCAACAGAGAAAAGATGACCCAGATCATGTTTGAGACCTTCAACACGCCCGCCATGTACGTCGCCATCCAGGCCGTACTCTCACTGTACGCCTCCGGTCGTACCACCGGTATCGTGCTGGACTCCGGAGACGGTGTCTCCCACACAGTACCCATCTACGAGGGATACGCCCTGCCTCACGCCATCCTGCGTCTGGACTTGGCGGGCCGTGACCTCACCGACTACCTGATGAAGATCCTCACTGAACGTGGATACTCTTTCACCACCACGGCCGAGAGAGAAATCGTTCGTGATATCAAGGAGAAGCTTTGCTACGTCGCTCTCGACTTCGAGCAGGAAATGGCCACCGCTGCCTCCAGCAGCTCCCTCGAGAAGTCTTACGAGCTTCCCGACGGACAGGTCATCACCATCGGAAACGAACGATTCCGTTGCCCTGAGGCTCTCTTCCAACCCTCATTCCTGGGTATGGAAGCATGCGGCATCCACGAAACTACTTACAACTCCATCATGAAGTGTGATGTGGACATCCGTAAGGACTTGTATGCCAACACAGTACTGTCGGGTGGTACCACCATGTACCCAGGCATCGCCGACCGTATGCAGAAGGAAATCACAGCTCTGGCACCTTCAACCATGAAGATCAAGATCATCGCTCCACCGGAGAGGAAATACTCCGTATGGATCGGAGGTTCCATCCTCGCGTCTCTGTCGACATTCCAACAGATGTGGATCTCGAAACAGGAGTACGACGAGTCCGGCCCCTCAATCGTGCACAGGAAGTGCTTCTAA

Protein sequence:

>DPOGS200328-PA
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF-

Group
KEGG pathway	api:100145822	0.0
	K05692 (ACTB_G1)	maps->	Pathogenic Escherichia coli infection
			Regulation of actin cytoskeleton
			Viral myocarditis
			Bacterial invasion of epithelial cells
			Tight junction
			Adherens junction
			Arrhythmogenic right ventricular cardiomyopathy (ARVC)
			Phototransduction - fly
			Vibrio cholerae infection
			Dilated cardiomyopathy
			Shigellosis
			Leukocyte transendothelial migration
			Hypertrophic cardiomyopathy (HCM)
			Phagosome
			Focal adhesion
InterPro domain	[2-376] IPR004000	0	Actin-like
Orthology group	MCL10033		Multiple-copy universal gene

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: