| DPOGS200355 | ||
|---|---|---|
| Transcript | DPOGS200355-TA | 372 bp |
| Protein | DPOGS200355-PA | 123 aa |
| Genomic position | DPSCF300026 + 620776-622618 | |
| RNAseq coverage | 6551x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL000029 | 3e-49 | 87.88% | |
| Bombyx | BGIBMGA005648-TA | 6e-47 | 84.69% | |
| Drosophila | CG4692-PB | 1e-42 | 75.76% | |
| EBI UniRef50 | UniRef50_Q9W141 | 2e-40 | 75.76% | Putative ATP synthase subunit f, mitochondrial n=33 Tax=Pancrustacea RepID=ATPK_DROME |
| NCBI RefSeq | XP_002050357.1 | 1e-42 | 78.79% | GJ22112 [Drosophila virilis] |
| NCBI nr blastp | gi|261335990 | 2e-46 | 87.88% | Similar to CG4692 [Heliconius melpomene] |
| NCBI nr blastx | gi|261335990 | 4e-49 | 87.88% | Similar to CG4692 [Heliconius melpomene] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | dme:Dmel_CG4692 | 1e-40 | ||
| K02130 (ATPeF0F, ATP5J2) | maps-> | Oxidative phosphorylation | ||
| InterPro domain | [1-100] IPR019344 | 6.3e-49 | Mitochondrial F1-F0 ATP synthase subunit F, predicted | |
| Orthology group | MCL10193 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200355-TA
ATGGGTTTCGGTGATTATCCTAAAGAATACAATCCAGCAGTCCACGGGCCATACGATCCAGCTCGTTATTATGGAAAACCTGATACTCCATTCGGACAGGTTAAGTTAAGTGAGATTGGATCATGGTTCGCACGTAGAAACAAAAGTCCTTCAGCTTTTATGGGCGCTTGCAGCCGAGCCTGGTGGCGCTGGCAGCATAAGTATGTGCAGCCCAAGAAGGTTGGCATGGCCCCATTCTTCCAATTGCTGGTTGGATCGATGACTTTCTTCTATGTTATTAACTATGGAAAAATGAAAGGCATGGACCAGCTCAGAGGTTTCGAGAGTTCACCCAATATACCGGTTGCCGATTCTTCTAACCCTCCCAAGTAA
>DPOGS200355-PA
MGFGDYPKEYNPAVHGPYDPARYYGKPDTPFGQVKLSEIGSWFARRNKSPSAFMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYVINYGKMKGMDQLRGFESSPNIPVADSSNPPK-