Monarch geneset OGS2.0

DPOGS200380
TranscriptDPOGS200380-TA837 bp
ProteinDPOGS200380-PA278 aa
Genomic positionDPSCF300026 + 1126228-1127555
RNAseq coverage207x (Rank: top 46%)
Annotation
HeliconiusHMEL0053852e-10769.04% 
BombyxBGIBMGA007222-TA3e-8670.19% 
DrosophilaCG13773-PA2e-2434.91% 
EBI UniRef50UniRef50_D3JSV95e-8470.19%RPA43_N protein n=2 Tax=Obtectomera RepID=D3JSV9_BOMMO
NCBI RefSeqNP_001166197.19e-8570.19%RPA43_N protein [Bombyx mori]
NCBI nr blastpgi|2896292262e-8370.19%RPA43_N protein [Bombyx mori]
NCBI nr blastxgi|2896292265e-8270.19%RPA43_N protein [Bombyx mori]
Group
Gene OntologyGO:00038991.1e-06DNA-directed RNA polymerase activity
GO:00063511.1e-06transcription, DNA-dependent
KEGG pathwaydme:Dmel_CG137731e-22 
 K03004 (RPA43)maps-> Purine metabolism
    Pyrimidine metabolism
    RNA polymerase
InterPro domain[31-98] IPR0055761.1e-06RNA polymerase Rpb7, N-terminal
Orthology groupMCL15065 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200380-TA
ATGTCTACTATAATTAAATTTGAATTGAAGGAGCTCCGAGAGTTAGCAAATGACAAAAAATCTTGTGTTATTGAAAAAAAGGTTATCCAAAATTTAGCGTTACAGCCATGGTGTCTTGGTAACTTAAAGGACTCCATTAAAAACTTGTTAGATTATAAAATAGGCAAATTTGACAAAGAATTCAATGGAATTCTCATAAGCTACAAAAATCTACGAATACTACAAAACATAGGTGCGATCCGTAATGACAATGCTGATATACATTTTCAAGTTCAGGCAGACTACTTCCTGTTTCGTCCTTATGTGGGAGCAACTTTAAAGGGGGTTGTTAATAAAAAGAGTGCAACACATCTTGCAATTCTGGTACATAGGGTTTTTAATGTAGTTATTCCGCGACCAACCGAGGAACCTGGCAATTATTGGAGTGGATCTAACATTGAGGAGGGACAAGAAGTAGTGTTCCAGATTGTTGTTTTGGATCTATATGGAGCTTTACCTTATATCAGGGGAAAGCTAGACGAGCAGTGGCTAAAAGTACTACAAGATGGTGATGACGAAATAGAAATTAAAAGAACAAAACCGCTGAACATATCTTATGTTGATTTTGACAAGACGAAACCAAAGTATGCAAATGAAAAATCACTAAACTCGTCGGAAACTAATACAGCCGAAAACAGCCACAGTAATGACAAAACTGAAAATAATGTTAAGCAAGATAACAACATAACAGAAAAAATTAAAAATAAAAGAAGAAGCAAGATAAATGACCTCGAAGAACAATATTCAGAGGACTCTGCCAATAAACCCAAGAAACGCAAAAAAGATAAACAAGAATAA

Protein sequence:

>DPOGS200380-PA
MSTIIKFELKELRELANDKKSCVIEKKVIQNLALQPWCLGNLKDSIKNLLDYKIGKFDKEFNGILISYKNLRILQNIGAIRNDNADIHFQVQADYFLFRPYVGATLKGVVNKKSATHLAILVHRVFNVVIPRPTEEPGNYWSGSNIEEGQEVVFQIVVLDLYGALPYIRGKLDEQWLKVLQDGDDEIEIKRTKPLNISYVDFDKTKPKYANEKSLNSSETNTAENSHSNDKTENNVKQDNNITEKIKNKRRSKINDLEEQYSEDSANKPKKRKKDKQE-