Monarch geneset OGS2.0

DPOGS200410
TranscriptDPOGS200410-TA828 bp
ProteinDPOGS200410-PA275 aa
Genomic positionDPSCF300236 - 458892-461116
RNAseq coverage619x (Rank: top 21%)
Annotation
HeliconiusHMEL0115981e-14084.56% 
BombyxBGIBMGA008987-TA1e-13283.58% 
DrosophilaCG15629-PA1e-9155.80% 
EBI UniRef50UniRef50_D6WW872e-9257.25%Putative uncharacterized protein n=2 Tax=Tribolium castaneum RepID=D6WW87_TRICA
NCBI RefSeqXP_001661689.11e-10165.82%short-chain dehydrogenase [Aedes aegypti]
NCBI nr blastpgi|1571109662e-10065.82%short-chain dehydrogenase [Aedes aegypti]
NCBI nr blastxgi|1571109666e-10366.06%short-chain dehydrogenase [Aedes aegypti]
Group
Gene OntologyGO:00054884.4e-60binding
GO:00081529.7e-30metabolic process
GO:00164919.7e-30oxidoreductase activity
KEGG pathwaycfa:4869989e-50 
 K11151 (RDH10)maps-> Retinol metabolism
InterPro domain[10-227] IPR0160404.4e-60NAD(P)-binding domain
[11-174] IPR0021989.7e-30Short-chain dehydrogenase/reductase SDR
[11-28] IPR0023473.4e-23Glucose/ribitol dehydrogenase
Orthology groupMCL11459 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200410-TA
ATGAGGCCAATGAAGAGTCTTAAGGATGACGTTATTCTGATAACGGGCGGAGGCGGTGGAGTCGGCAGACAATTAGCTATTAGGTTAGCAAGACTTGGAGCTAGGGTCATCCTATGGGATATCAATAAAGAAGCGCTAGAAAAATCCTGCAACGATTTAAAAGATGAAGGCTACGAAGTGAGAGGGGATGTTGTAGACCTAGCAGATAAAGAATCCGTTTACGCCGCTGCCGATAAAGTCAAGAAAGAGGTTGGAAAGGTTGATATTCTAATAAACAACGCTGGTGTCGTATTCGGTGAAACACTATTGGATCTTAGCGATACAGCGATAGAGACAACATATAAAGTGAACATTTTAGCACATTACTGGACGACGAAGTCTTTTCTTCCGGACATGATCAATTCTGGAAAAGGTCATATAGTCACTGTAGGTTCGGTCGCAGGCTTGCTTGGAACATACCGCTGTACAGATTACAGCGCCACTAAGTTTGCTACAGTCGGCTTTCATGAAAGCCTTTTCACAGAGTTGAGAGCCCATGGTCATAACACAATATACTCGACCCTGGTTTGCCCATATTACATCAACACGGGTATGTTTGATGGTGTAACTCCTCGTCTCATGCCGATGTTGGAACCGGACTACGTAGCGGAGACTATGATCGATTCCATAAGGAAAAACGAGGTCAACTGCATTATGCCCGGATCTGTCAGATATCTTTTGCCTTTGAAGTGCTTGCTTCCAGCAAAAATGTGTTGGGATCTAATGCACAGAGTAATGAAAGGGCCACAGTCTATGATGCATTTAAAAAGAAAACCTAAATTGACTTAA

Protein sequence:

>DPOGS200410-PA
MRPMKSLKDDVILITGGGGGVGRQLAIRLARLGARVILWDINKEALEKSCNDLKDEGYEVRGDVVDLADKESVYAAADKVKKEVGKVDILINNAGVVFGETLLDLSDTAIETTYKVNILAHYWTTKSFLPDMINSGKGHIVTVGSVAGLLGTYRCTDYSATKFATVGFHESLFTELRAHGHNTIYSTLVCPYYINTGMFDGVTPRLMPMLEPDYVAETMIDSIRKNEVNCIMPGSVRYLLPLKCLLPAKMCWDLMHRVMKGPQSMMHLKRKPKLT-