DPOGS200422 | ||
---|---|---|
Transcript | DPOGS200422-TA | 858 bp |
Protein | DPOGS200422-PA | 285 aa |
Genomic position | DPSCF300236 - 137373-149513 | |
RNAseq coverage | 216x (Rank: top 45%) |
Annotation | ||||
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Heliconius | HMEL002495 | 2e-112 | 94.21% |   |
Bombyx | BGIBMGA008996-TA | 4e-54 | 48.80% |   |
Drosophila | CG10348-PB | 2e-50 | 65.75% |   |
EBI UniRef50 | UniRef50_D6WWQ2 | 9e-53 | 46.08% | Putative uncharacterized protein n=2 Tax=Tribolium castaneum RepID=D6WWQ2_TRICA |
NCBI RefSeq | XP_001815516.1 | 1e-53 | 46.08% | PREDICTED: similar to CG10348 CG10348-PA [Tribolium castaneum] |
NCBI nr blastp | gi|189240185 | 2e-52 | 46.08% | PREDICTED: similar to CG10348 CG10348-PA [Tribolium castaneum] |
NCBI nr blastx | gi|270012296 | 9e-57 | 47.08% | hypothetical protein TcasGA2_TC006419 [Tribolium castaneum] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0003676 | 1.3e-12 | nucleic acid binding | |
GO:0008270 | 1.7e-08 | zinc ion binding | ||
GO:0005622 | 1.7e-08 | intracellular | ||
KEGG pathway | spu:593671 | 6e-50 |   | |
  | K04462 (EVI1) | maps-> | Pathways in cancer | |
  |   |   | MAPK signaling pathway | |
  |   |   | Chronic myeloid leukemia | |
InterPro domain | [161-188] IPR013087 | 1.3e-12 | Zinc finger, C2H2-type/integrase, DNA-binding | |
[162-184] IPR007087 | 1.7e-08 | Zinc finger, C2H2 | ||
Orthology group | MCL34354 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200422-TA
ATGGGTGGTAACAAGCACATCCCTTTGAATAAGTGCACATACGGTAGTGATGCTGTACGTAAAACAGGTCGGTGGCGCACGAGCCTGATGAGTTCGTGCGCGGCGGCCGCCATGCGCGAAAAGCACGCGGCGCCGCGCCGCCTCGCCTCTCCTCCGACCTCGCCCCTCCAGCGACACCCTAGCCCTCTTGGTTCACCTCGCCCTGACGAGCCCCTTGACCTCAGAGTCACACACAAGCGACCGCAACGGCTGGAGGATGAGAACTGTAATCTCATTCCCTCACCGCCACCTCACCCTACTCATCCAGCACATCCAGCGCATCCAGCTCTGCTTCAGTTCTGCCGACGATTACCCTTGGCTCTACCGGCGTCTTTCGGCCGTTACCCCTTCTTACCCGCAGCAGCTGCGACCCTTCTAGCGCCAGGGGCGCCCAGAGCTCCTCCCGTTCCCCAAAATGCCGGAGTGAATAGAGCCCGGGATCGGTACACGTGCTCCTATTGTGGAAAGGCGTTCCCGCGAAGTGCTAATCTGACGAGACATTTACGGACACATACAGGCGAACAGCCTTATCGCTGCAAATATTGTGAACGATCATTCTCAATATCTTCGAACCTGCAAAGACACGTGAGGAATATTCATAACAAGGAACGGCCGTTTCGATGTCGTCACTGCGACCGCTGTTTCGGCCAGCAGACAAATCTGGATAGGCATCTCAAAAAGCACGAAGCCGAGAACGGGGACGATAATCGTCGCAGATCGCCAGAAGAGACCTACTTTGAAGAAATAAGGTCGTTCATGGGACGTGTGGCGCCAGCAAGGCGGACTGCCGCCGCCGCAAGTATCGCAGACCACACCTGA
>DPOGS200422-PA
MGGNKHIPLNKCTYGSDAVRKTGRWRTSLMSSCAAAAMREKHAAPRRLASPPTSPLQRHPSPLGSPRPDEPLDLRVTHKRPQRLEDENCNLIPSPPPHPTHPAHPAHPALLQFCRRLPLALPASFGRYPFLPAAAATLLAPGAPRAPPVPQNAGVNRARDRYTCSYCGKAFPRSANLTRHLRTHTGEQPYRCKYCERSFSISSNLQRHVRNIHNKERPFRCRHCDRCFGQQTNLDRHLKKHEAENGDDNRRRSPEETYFEEIRSFMGRVAPARRTAAAASIADHT-