| DPOGS200460 | ||
|---|---|---|
| Transcript | DPOGS200460-TA | 495 bp |
| Protein | DPOGS200460-PA | 164 aa |
| Genomic position | DPSCF300260 + 116517-120346 | |
| RNAseq coverage | 573x (Rank: top 22%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013067 | 4e-66 | 61.90% | |
| Bombyx | BGIBMGA011403-TA | 2e-61 | 59.02% | |
| Drosophila | Sgt1-PA | 1e-29 | 39.23% | |
| EBI UniRef50 | UniRef50_D6WUH6 | 1e-34 | 38.03% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WUH6_TRICA |
| NCBI RefSeq | XP_001599865.1 | 3e-44 | 48.56% | PREDICTED: similar to SGT1, suppressor of G2 allele of SKP1 [Nasonia vitripennis] |
| NCBI nr blastp | gi|345497190 | 6e-43 | 49.02% | PREDICTED: suppressor of G2 allele of SKP1 homolog [Nasonia vitripennis] |
| NCBI nr blastx | gi|321471341 | 4e-38 | 45.54% | hypothetical protein DAPPUDRAFT_302577 [Daphnia pulex] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | nvi:100113998 | 9e-44 | ||
| K12795 (SUGT1, SGT1) | maps-> | Plant-pathogen interaction | ||
| NOD-like receptor signaling pathway | ||||
| InterPro domain | [94-162] IPR007699 | 7.5e-27 | SGS | |
| [8-93] IPR008978 | 2.7e-19 | HSP20-like chaperone | ||
| [18-91] IPR017447 | 2.2e-18 | CS domain | ||
| Orthology group | MCL11874 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200460-TA
ATGGGAGAACCCCATGAGACACCGGCTCCCGAGGTACTGAAACCTAAAATTAAGCATGACTGGTATCAAACTGATGCTCTAGTGGTGGTGACAATTCTTCTCAAGAATGCTCAGAGTGACAAAGTTAAAGTTGTTTATGGTGAGCGTAGTCTGTCCGTATCAAGTCCAATACCAAACTCGGAATCTGAATACAGTCTAGAAATAGAATTGGCCCACGAGATAGTGCCGTCAATGTGTACACACGTTGTATCACCATCCAAGATAGAAATTCTTTTCCGACAGGAGGAAGAGGAGAAACCTCAAGGAGACGCAGCGCTTAATGCTCTGTTCCAGAAAATATACGGAGAGGGGTCGGACGAGGTCAGGAGAGCGATGAACAAGAGCTTTGTGGAATCCGGCGGAACTGTCCTCAGCACGAACTGGAATCAGGTCGGCAAAGAGAAAGTCGAAGTGAAGCCCCCGGACGGACTGGAATTCAAGAAGTGGGACGATTAA
>DPOGS200460-PA
MGEPHETPAPEVLKPKIKHDWYQTDALVVVTILLKNAQSDKVKVVYGERSLSVSSPIPNSESEYSLEIELAHEIVPSMCTHVVSPSKIEILFRQEEEEKPQGDAALNALFQKIYGEGSDEVRRAMNKSFVESGGTVLSTNWNQVGKEKVEVKPPDGLEFKKWDD-