| DPOGS200498 | ||
|---|---|---|
| Transcript | DPOGS200498-TA | 444 bp |
| Protein | DPOGS200498-PA | 147 aa |
| Genomic position | DPSCF300158 + 251455-253048 | |
| RNAseq coverage | 7818x (Rank: top 2%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005107 | 3e-83 | 95.42% | |
| Bombyx | BGIBMGA010541-TA | 1e-55 | 96.19% | |
| Drosophila | eff-PA | 2e-82 | 97.28% | |
| EBI UniRef50 | UniRef50_Q9Y2X8 | 3e-75 | 90.48% | Ubiquitin-conjugating enzyme E2 D4 n=366 Tax=root RepID=UB2D4_HUMAN |
| NCBI RefSeq | XP_001605481.1 | 4e-81 | 97.28% | PREDICTED: similar to ubiquitin-conjugating enzyme [Nasonia vitripennis] |
| NCBI nr blastp | gi|24646906 | 8e-80 | 97.28% | effete [Drosophila melanogaster] |
| NCBI nr blastx | gi|24646906 | 2e-81 | 97.28% | effete [Drosophila melanogaster] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 5.3e-52 | acid-amino acid ligase activity | |
| KEGG pathway | api:100145836 | 1e-80 | ||
| K06689 (UBE2D_E, UBC4, UBC5) | maps-> | Ubiquitin mediated proteolysis | ||
| Protein processing in endoplasmic reticulum | ||||
| InterPro domain | [1-147] IPR016135 | 8.7e-79 | Ubiquitin-conjugating enzyme/RWD-like | |
| [5-141] IPR000608 | 5.3e-52 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL11048 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200498-TA
ATGGCGTTAAAACGAATTAATAGGGAATTACAAGATCTGGGTCGAGACCCCCCAGCACAATGTTCCGCAGGACCACACGGGGAAGATCTATTCCACTGGCAGGCCACAATTATGGGTCCAGTGGACAGTCCTTACCAGGGTGGAGTGTTCTTTCTGACCATACATTTCCCTACAGACTATCCATTTAAACCACCAAAGGTTGCGTTCACGACACGTATCTATCACCCCAACATAAACAGTAATGGTTCCATTTGTCTTGATATCTTGCGTTCACAATGGTCGCCAGCTCTTACTATATCCAAAGTGTTGCTGTCAATTTGCTCACTGTTATGTGATCCGAACCCCGATGATCCACTGGTGCCAGAAATCGCTAGGATCTACAAAACTGACAGAGAAAAGTACAATGAATTAGCCCGAGAGTGGACAAGGAAGTATGCCATGTGA
>DPOGS200498-PA
MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM-