DPOGS200523 | ||
---|---|---|
Transcript | DPOGS200523-TA | 909 bp |
Protein | DPOGS200523-PA | 302 aa |
Genomic position | DPSCF300119 - 453309-457752 | |
RNAseq coverage | 780x (Rank: top 16%) |
Annotation | ||||
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Heliconius | HMEL005490 | 2e-125 | 65.64% |   |
Bombyx | BGIBMGA009341-TA | 1e-86 | 53.42% |   |
Drosophila | CG8336-PB | 8e-57 | 40.79% |   |
EBI UniRef50 | UniRef50_Q08752 | 4e-58 | 41.78% | Peptidyl-prolyl cis-trans isomerase D n=54 Tax=Euteleostomi RepID=PPID_HUMAN |
NCBI RefSeq | XP_002007987.1 | 5e-62 | 44.00% | GI13253 [Drosophila mojavensis] |
NCBI nr blastp | gi|45360623 | 1e-64 | 46.58% | peptidyl-prolyl cis-trans isomerase D [Xenopus (Silurana) tropicalis] |
NCBI nr blastx | gi|326918269 | 7e-63 | 43.84% | PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Meleagris gallopavo] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006457 | 8.1e-37 | protein folding | |
GO:0003755 | 8.1e-37 | peptidyl-prolyl cis-trans isomerase activity | ||
GO:0005488 | 3.6e-11 | binding | ||
KEGG pathway | xtr:394581 | 2e-65 |   | |
  | K05864 (CYPD, PPID) | maps-> | Huntington's disease | |
  |   |   | Calcium signaling pathway | |
  |   |   | Parkinson's disease | |
InterPro domain | [1-102] IPR015891 | 7.5e-37 | Cyclophilin-like | |
[1-101] IPR002130 | 8.1e-37 | Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | ||
[133-206] IPR023114 | 1.4e-14 | Elongated TPR repeat-containing domain | ||
[207-268] IPR011990 | 3.6e-11 | Tetratricopeptide-like helical | ||
Orthology group | MCL13876 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200523-TA
ATGATCCAGGGTGGTGATATCATACATGGTAATGGTACCGGCGGTGAGAGCATCTACGGCCTGACCTTCGAAGATGAAAACTTCAAGCTTATTCATGAAGCAGGTGTCCTCAGTATGGCGAATGCTGGGCCAAATACGAACGGATCACAATTTTGCATCACCAGTGTGCCTTGTCCACAACTAGATGGCACTAACGTAGTTTTTGGACGGGTGCTGGCTGGCCTGGGGATAGTTCAGGAGATACAGAGCCTGTCCAGTGACGATACGCCCTCGGTCGAGTGTGTGATCGATGACTGCGGTGAGATAGCGGACCTGGATACATGGGATGTTTGCTGTCAGGATGGAACTTTGGACAGATTGCCGGAACATCCCGAGGATATGAGAACCAACCTCACTATGGACGAGCTCGTTGAAAGTATTCGCCGGGTGAAGGAGAGTGGTAATGATCTGTTTGGTGCGGGACGGTATAAGGCCGCTGCGAGGAAGTACCGGAAATGTAACAGATACGTCACACAGGCACAGGAAGTGGCAGCCAAGGACGGGGATAAGTACCTGAGCGAGCTGTCCTCGTGCGGTCGTCACTGTTGTCTCAACCTGGCGGCGTGTCAGTGCCGTCTGAGGGACTACCGCGCCGCTCTGAGCAGCTGCGATCAGGTACTCGACGTGGACCCCAAGAACGAGAAGGCCCTCTATCGCCGCGGTCAAGCAAACTACGCTCTGAAGAACTACGAGGCGGCTCTGAGCGATCTCAAGCTAGCGGATAAAGTTTCCCCGCGGAACAAAGCCGTCCAGAAGCTACTGGAAGAGGTCCGCGCGTCCAACAAAAACTACAACGACATACAAAAGCAGCGGCTGTCAAAATTTTTTCGTGACCAAAAAGAAAAAAACACAACGTTCGGACATCACTGA
>DPOGS200523-PA
MIQGGDIIHGNGTGGESIYGLTFEDENFKLIHEAGVLSMANAGPNTNGSQFCITSVPCPQLDGTNVVFGRVLAGLGIVQEIQSLSSDDTPSVECVIDDCGEIADLDTWDVCCQDGTLDRLPEHPEDMRTNLTMDELVESIRRVKESGNDLFGAGRYKAAARKYRKCNRYVTQAQEVAAKDGDKYLSELSSCGRHCCLNLAACQCRLRDYRAALSSCDQVLDVDPKNEKALYRRGQANYALKNYEAALSDLKLADKVSPRNKAVQKLLEEVRASNKNYNDIQKQRLSKFFRDQKEKNTTFGHH-