Monarch geneset OGS2.0

DPOGS200528
TranscriptDPOGS200528-TA4368 bp
ProteinDPOGS200528-PA1455 aa
Genomic positionDPSCF300119 - 362573-389443
RNAseq coverage110x (Rank: top 59%)
Annotation
HeliconiusHMEL0128855e-5055.87% 
BombyxBGIBMGA009345-TA0.062.17% 
DrosophilaPOSH-PA8e-7650.00% 
EBI UniRef50UniRef50_D2A0246e-8560.24%Plenty of SH3s n=2 Tax=Tribolium castaneum RepID=D2A024_TRICA
NCBI RefSeqXP_001606578.12e-8757.45%PREDICTED: similar to GA18517-PA [Nasonia vitripennis]
NCBI nr blastpgi|3454879412e-8657.45%PREDICTED: SH3 domain-containing RING finger protein 3-like [Nasonia vitripennis]
NCBI nr blastxgi|3454879412e-8156.73%PREDICTED: SH3 domain-containing RING finger protein 3-like [Nasonia vitripennis]
Group
Gene OntologyGO:00055152.9e-18protein binding
GO:00082701.6e-07zinc ion binding
KEGG pathway 
InterPro domain[108-171] IPR0014522.9e-18Src homology-3 domain
[6-82] IPR0130838.6e-14Zinc finger, RING/FYVE/PHD-type
[12-52] IPR0189574.3e-08Zinc finger, C3HC4 RING-type
[12-52] IPR0018411.6e-07Zinc finger, RING-type
Orthology groupMCL12520 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200528-TA
ATGGATGAGGGTCTTCTGAATGATCTCCTCGAGTGTTCGGTGTGTCTGGAGAGACTAGACACCTCGTCACGAGTATTGCCATGTCAGCACACATTCTGCCTGAAATGTTTGAAGGTGATAGTAGAGTCTCACAAGGAGCTGCGTTGTCCAGAATGCCGCGTGCTGGTGGAGGCTCGGGTGGAGGAGCTGCCTCCGAACGTGCTGCTGATGAGGATCCTCGAGGGCATGAAGAACGCGCCAAGGAAAACCAGCTCAGCCAGAAATAAGGGCACTCACGCACAGGCTGCGTCAGTAGTACATCAGTCAGCCCGTGCGAACAGACAGCCCCCGCCCCACGGCCGTGCTCTATATGATTTCGTCTCAAAAGAACCAGGTGATCTGTCATTCAAGAAAGGCGAGACTATATTGCTTCAGAAGAAGTTGGATACGTTCTGGTACCACGGGGAATGTTCTGGAAGGACTGGCATGTTCCCTATTACATATGTACAGGTGGTGGTACCACTCCCGGTACCGTCGGCGCTGTGCAAGGCTCTCTACGACTTCCGGATGTCGGCTCCTGACGAAGAAGGCTGTCTGGCCTTCGATAAAGGTGCAATAATAACAGTTCATCGAAGAGTTGATGAGAACTGGGCTGAAGGTAGACTGGAACAGAGGGTCGGCATCTTCCCTATAGCTTTTGTAGAACTGAATCACGCGGCCAGGCTCCTTATGAACAACACTTCATTGAACCGGCCTGTTCCTCCTATCCCTGAACACTCCAGGGCTGGACACTCTGAACACAGATACCATCATCCGCACAGATATCAGCAGATGACGATGTCGACACCGACGGCGGCTGGTCAAGGGAACTATCAGAATATAGCTACCATGAGTCAATCCCATCCCAACTACCATCAAGCCATGGCACAGCAATCTATCCTCGTACCACAGCAAGTGAACCAAGTGAGCAACATCGGCCTGATCTCCGCAGTACCCAGGAGCATCATAGAACAGACAAAGAACCCCATAGACATGATAAACCATTTCATCAACATGAGCAAACCCCACCAGACCATACAAGTCCAAAGTGTACCGCGTATAGGTGAGAACTACGACAGACTGCGAGCGGCGAAATTTGATAACTACGCGAACCCCAAAATGGAAATGACGTATCAGAATGTTAGGGCGGAACAGTTTCCGGTGGCAAGTTTCAATAACGTCAGCTCCGATTCGAGTTCCAGTGTCACACCGTCTGGTAACGTTGGCGGCAGTTCGACGAACACACCGAACACGAGCTCGAACACCAGCACCTGTGAGAGCGCCGAACCGAGTCTGCCGAGCTCGCCGGATAATAACACAGAGCGGAATTCAACCGTAACACCATGTAATAACGGCCAAAATGAAACTAATGAAACTCCGGATTCACTAAACGCTTCCATTGGAGTGCTGAGTCTGAACGAAAGTTCCACAGCGACGAATACGTCGCTGAATGTCAGCCTGCCTTCAGAAGGTCCACCGTCGACTGCATGCAATGGGAGTAATTCATTGCCAAATCAAGTCGAAAGCCAAGAGGCTGCCGGTAATAATGAACCTTCGAGATTAGAAATTCCATCGTCGTCGAAGAATGTTCAGACTCGGTCTAGCGGTCCAGACTCCTTACTTACTTTCGGTCTAGGTCTGCAGGCCGCCTTATCCCCGTCCCATAAGGAAGGAAACCACATGGTCAGAGGACACCATAAAGAGAGGGAAAAGAGACACAGTTTGACCCCATCGTCACATTTACAAGGGAACCATACACCAAACAGGCATTCAGCTGAGATTCTAGCTACGAGTCTTCTAGATACAACGGAACGAGAGAGGCCGGAGAGAGATAGAGATAGAACAGAGAGAGAAAGAGAGAGACGGAGACGAAGATCTAGAAGCAACGAGCGTCCCCTACCCGCCGCCTACATAGCGCTGTACCCTTACAAGCCGCAGAAACCGGACGAATTAGAATTAAAGAAAGGAGGTATATATACTGTATCGGAACGTTGTCGCGACGGGTGGTACAAAGGTTGCTGCGAGCGATCCTGTCGTGGCGGCGTGTTCCCCGGGAACTATGTGGCTCCGCTGGCTGCCACTACCACCACCCCCACCACCACACGACCCCGACATGAGAAGTCTGTGACGTCATCGGCGAAACCAGCGCCGTGTTCTCAAGGCCCCTCCAATGTCTTGGCACCGCCTGACGCTCCACCACGCGCTACAAGCCCTACAATCACCGGACAACCTTTAACATACCCATGGAGCTCACCCATACAACATCAGCAGAACACTCCCAGAGCTGATAAGCATCCGCACAGATATCAGCAGATGACGATGTCGACACCGACGGCGGCTGGTCAAGGGAACTATCAGAATATAGCTACCATGAGTCAATCCCATCCCAACTACCATCAAGCCATGGCACAGCAATCTATCCTCGTACCACAGCAAGTGAACCAAGTGAGCAACATCGGCCTGATCTCCGCAGTACCCAGGAACATCATAGAACAGACTAAGAACCCCATAGACATGATAAACCATTTCATCAACATGAGCAAACCCCACCAGACCATACAAGTCCAAAGTGTACCGCGTATAGGTGAGAACTACGATAGACTGCGAGCGGCGAAATTTGATAACTACGCGAACCCCAAAATGGAAATGACGTATCAGAATGTTAGGGCGGAACAGTTTCCGGTGGCAAGTTTCAATAACGTCAGCTCCGATTCGAGTTCCAGTGTCACACCGTCTGGTAACGTTGGCGGCAGTTCGACGAACACACCGAACACGAGCTCGAACACCAGCACCTGTGAGAGCGCCGAACCGAGTCTGCCGAGCTCGCCGGATAATAACACAGAGCGGAATTCAACCGTAACACCATGTAATAACGGCCAAAATGAAACTAACGAAACTCAGGATTCACTAAACGCTTCCATTGGAGTGCTGAGTCTGAACGAAAGTTCCACAGCGACTAATACGTCGCTGAATGTCAGCCTGCCTTCAGAAGGTCCACCGTCGACTGCATGCAATGGGAGTAATTCATTGCCAAATCAAGTCGAAAGCCAAGAGGCTGCCGGTAATAATGAACCTTCGAGATTAGAAATTCCATCGTCGTCGAAGAATGTTCAGTCTCGGTCTAGCGGTCCAGACTCCTTACTTACTTTCGGTCTAGGTCTGCAGGCCGCCTTATCCCCGTCCCATAAGGAAGGAAACCACATGGTCAGAGGACACCATAAAGAGAGGGAAAAGAGACACAGTTTGACCCCATCGTCACATTTACAAGGGAACCATACACCAAACAGGCATTCAGCTGAGATTCTAGCTACGAGTCTTCTAGATACAACGGAACGAGAGAGACCGGAGAGAGATAGAGATAGAACAGAGAGAGAAAGAGAGAGACGGAGACGAAGATCTAGAAGCAACGAGCGTCCCCTACCCGCAGCTTACATAGCGCTGTACCCTTACAAGCCGCAGAAACCGGACGAATTAGAGTTAAAGAAAGGAGGTATATATACTGTATCGGAACGTTGTCGCGACGGGTGGTACAAAGGTTGCTGCGAGCGATCCTGTCGTGGGGGCGTGTTCCCCGGGAACTATGTGGCTCCGCTGGCTGCCACTACCACCACCCCCACCACCACACGACCCCGACATGAGAAGTCTGTGACGTCATCGGCGAAACCAGCGCCGTGTTCTCAAGGCCCCTCCAATGTCTTGGCACCGCCTGACGCTCCACCACGCGCTACAAGCCCTACAATCACCGGACAACCTTTAACATACCCATGGAGCTCACCCATACAACATCAACAGAACACTCCCAGAGCTGATAAGTCGAAAGAAAAATCGAAGGCCGAGAAATCTTTATCAACCGGCGTTTCTCTAATGAAGAGGCTCACGGCTATGAAGAAATGTAAATCTCCTCCGCCAGTAGGGTACAGCATGGACAATCCCGTGTTTGACGACGGCCCGGGGACCTCGCTGATGCCGCATCCCGTGCATGTTCGAGTAGTACACAGTAGAGGTGACAGGTCGGGGTCGTGCCCCTCGCAGCTGTTGAGAGCTCTACCCGCCGCCCGTCTACGGCACGATCGACTACACAGCCGCGGTTCGGGCGACGCGGAGTGGGGACACCGCAAGTCGGCGTCACTGGACGTGTCGCGGCGGGAAAGACACGCGCCAGTTAAAGAAAAATTTCGCTGTATTGTTCCGTATCCACCGAATTCTGAATACGAATTGGAGTTGAAGGTTGATGATATAGTGTTGGTGTGTAAGAAGAGGGGTGACGGCTGGTACAAGGGTACTTTACAACGTACGGGTCGGACAGGATTATTCCCGGCATCTTTCGTACAAAGCTGTCCCCCGGATTGA

Protein sequence:

>DPOGS200528-PA
MDEGLLNDLLECSVCLERLDTSSRVLPCQHTFCLKCLKVIVESHKELRCPECRVLVEARVEELPPNVLLMRILEGMKNAPRKTSSARNKGTHAQAASVVHQSARANRQPPPHGRALYDFVSKEPGDLSFKKGETILLQKKLDTFWYHGECSGRTGMFPITYVQVVVPLPVPSALCKALYDFRMSAPDEEGCLAFDKGAIITVHRRVDENWAEGRLEQRVGIFPIAFVELNHAARLLMNNTSLNRPVPPIPEHSRAGHSEHRYHHPHRYQQMTMSTPTAAGQGNYQNIATMSQSHPNYHQAMAQQSILVPQQVNQVSNIGLISAVPRSIIEQTKNPIDMINHFINMSKPHQTIQVQSVPRIGENYDRLRAAKFDNYANPKMEMTYQNVRAEQFPVASFNNVSSDSSSSVTPSGNVGGSSTNTPNTSSNTSTCESAEPSLPSSPDNNTERNSTVTPCNNGQNETNETPDSLNASIGVLSLNESSTATNTSLNVSLPSEGPPSTACNGSNSLPNQVESQEAAGNNEPSRLEIPSSSKNVQTRSSGPDSLLTFGLGLQAALSPSHKEGNHMVRGHHKEREKRHSLTPSSHLQGNHTPNRHSAEILATSLLDTTERERPERDRDRTERERERRRRRSRSNERPLPAAYIALYPYKPQKPDELELKKGGIYTVSERCRDGWYKGCCERSCRGGVFPGNYVAPLAATTTTPTTTRPRHEKSVTSSAKPAPCSQGPSNVLAPPDAPPRATSPTITGQPLTYPWSSPIQHQQNTPRADKHPHRYQQMTMSTPTAAGQGNYQNIATMSQSHPNYHQAMAQQSILVPQQVNQVSNIGLISAVPRNIIEQTKNPIDMINHFINMSKPHQTIQVQSVPRIGENYDRLRAAKFDNYANPKMEMTYQNVRAEQFPVASFNNVSSDSSSSVTPSGNVGGSSTNTPNTSSNTSTCESAEPSLPSSPDNNTERNSTVTPCNNGQNETNETQDSLNASIGVLSLNESSTATNTSLNVSLPSEGPPSTACNGSNSLPNQVESQEAAGNNEPSRLEIPSSSKNVQSRSSGPDSLLTFGLGLQAALSPSHKEGNHMVRGHHKEREKRHSLTPSSHLQGNHTPNRHSAEILATSLLDTTERERPERDRDRTERERERRRRRSRSNERPLPAAYIALYPYKPQKPDELELKKGGIYTVSERCRDGWYKGCCERSCRGGVFPGNYVAPLAATTTTPTTTRPRHEKSVTSSAKPAPCSQGPSNVLAPPDAPPRATSPTITGQPLTYPWSSPIQHQQNTPRADKSKEKSKAEKSLSTGVSLMKRLTAMKKCKSPPPVGYSMDNPVFDDGPGTSLMPHPVHVRVVHSRGDRSGSCPSQLLRALPAARLRHDRLHSRGSGDAEWGHRKSASLDVSRRERHAPVKEKFRCIVPYPPNSEYELELKVDDIVLVCKKRGDGWYKGTLQRTGRTGLFPASFVQSCPPD-