Monarch geneset OGS2.0

DPOGS200569
TranscriptDPOGS200569-TA1269 bp
ProteinDPOGS200569-PA422 aa
Genomic positionDPSCF300119 + 460747-462015
RNAseq coverage480x (Rank: top 26%)
Annotation
HeliconiusHMEL0054910.099.51% 
BombyxBGIBMGA009359-TA0.098.53% 
DrosophilaAP-47-PA0.092.02% 
EBI UniRef50UniRef50_O625310.092.02%AP-47 n=160 Tax=Eukaryota RepID=O62531_DROME
NCBI RefSeqXP_968639.10.095.73%PREDICTED: similar to AGAP011374-PA [Tribolium castaneum]
NCBI nr blastpgi|910935750.095.73%PREDICTED: similar to AGAP011374-PA [Tribolium castaneum]
NCBI nr blastxgi|910935750.095.73%PREDICTED: similar to AGAP011374-PA [Tribolium castaneum]
Group
Gene OntologyGO:00068865.1e-191intracellular protein transport
GO:00301315.1e-191clathrin adaptor complex
GO:00161925.1e-191vesicle-mediated transport
GO:00055157.9e-101protein binding
GO:00068102.9e-40transport
KEGG pathwaytca:6570590.0 
 K12393 (AP1M)maps-> Lysosome
InterPro domain[2-421] IPR0013925.1e-191Clathrin adaptor, mu subunit
[156-421] IPR0089687.9e-101Clathrin adaptor, mu subunit, C-terminal
[1-142] IPR0110122.9e-40Longin-like
[5-133] IPR0227757.5e-07AP complex, mu/sigma subunit
Orthology groupMCL10155 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200569-TA
ATGTCGTCGTCAGCGATTTACATATTGGACGTTAAAGGTAAAGTTCTCATATCGAGAAATTACCGAGGCGATGTAGATATGGGTGTTATCGACAAGTTCATGCCGCTTCTAATGGAGAAGGAGGAAGAAGGGATGTTAACACCATTGCTGCAAACAAGCGAATGTACTTTCGCTTATATTAAGACTAATAATCTTTACATTGTATCAACAACAAAGAAGAATGCCAACATTGCCCTTGTGTTTGTATTTCTTTACAAAATAGTAGAGGTTATGACTGAGTACTTCAAAGAATTAGAAGAAGAGAGTATTAGAGATAATTTTGTTGTTATCTATGAGTTGATGGATGAGTTACTTGATTTTGGTTACCCACAGACCACTGATAGCAAGATACTACAAGAATATATAACCCAGGAGGGTCACAAACTTGAAATGCAACCACGAATACCGATGGCAGTAACCAATGCTGTTTCGTGGAGGTCGGAAGGCATTAAATACAGGAAAAACGAAGTATTCCTAGATGTGATAGAGTCAGTTAATCTATTAGCTAACTCCAATGGAAATGTTTTGAGAAGTGAGATTGTAGGGGCAATCAAAATGAGGGTCTACTTATCAGGGATGCCTGAACTAAGATTAGGATTAAATGATAAAGTGCTTTTCGAGAGCACAGGCAGAGGGAAATCTAAGTCTGTAGAATTGGAAGATGTAAAATTTCATCAATGTGTTAGATTGTCGAGATTTGAAAATGACAGAACTATATCTTTTATCCCACCAGATGGTGAATTCGAACTCATGTCATACAGATTAAACACTCATGTTAAGCCTCTGATTTGGATTGAATCAGTTATTGAACGACATGCCCACTCCCGGGTTGAATACATGATCAAAGCTAAATCACAATTCAAGAGACGTTCAACTGCTAATAATGTTGAGATAATCATACCAGTACCAGCCGATGCTGATTCTCCTAAATTTAAAACCACAATTGGCAGTGTGAAATATACACCTGAACAGAATGCCATAACCTGGTCTATAAAATCTTTCCCTGGCGGCAAAGAGTACTTGATGCGGGCTCACTTTGGTTTGCCTTCAGTGGAGTGCGAGGATACAGATGGGAAACCACCTATTCAAGTCAAATTTGAGATTCCATACTTCACCACTTCCGGGATACAAGTTAGATATCTTAAAATCATTGAAAAAAGTGGCTATCAAGCTCTGCCATGGGTCAGATATATCACTCAGAACGGAGACTATCAATTAAGGACTAATTAA

Protein sequence:

>DPOGS200569-PA
MSSSAIYILDVKGKVLISRNYRGDVDMGVIDKFMPLLMEKEEEGMLTPLLQTSECTFAYIKTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELMDELLDFGYPQTTDSKILQEYITQEGHKLEMQPRIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANSNGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECEDTDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRTN-