| DPOGS200572 | ||
|---|---|---|
| Transcript | DPOGS200572-TA | 603 bp |
| Protein | DPOGS200572-PA | 200 aa |
| Genomic position | DPSCF300119 + 478332-479957 | |
| RNAseq coverage | 576x (Rank: top 22%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017959 | 2e-45 | 48.81% | |
| Bombyx | BGIBMGA009361-TA | 3e-115 | 97.52% | |
| Drosophila | Rab30-PB | 8e-92 | 77.62% | |
| EBI UniRef50 | UniRef50_Q15771 | 2e-75 | 67.68% | Ras-related protein Rab-30 n=86 Tax=Bilateria RepID=RAB30_HUMAN |
| NCBI RefSeq | XP_001601645.1 | 5e-105 | 89.85% | PREDICTED: similar to GA21542-PA [Nasonia vitripennis] |
| NCBI nr blastp | gi|345484883 | 3e-102 | 89.95% | PREDICTED: ras-related protein Rab-30-like [Nasonia vitripennis] |
| NCBI nr blastx | gi|345484883 | 8e-99 | 89.95% | PREDICTED: ras-related protein Rab-30-like [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1.8e-88 | small GTPase mediated signal transduction | |
| GO:0005525 | 1.8e-88 | GTP binding | ||
| GO:0015031 | 1.8e-88 | protein transport | ||
| GO:0016020 | 4.8e-29 | membrane | ||
| GO:0007165 | 4.8e-29 | signal transduction | ||
| GO:0006184 | 4.8e-29 | GTP catabolic process | ||
| GO:0003924 | 4.8e-29 | GTPase activity | ||
| GO:0005622 | 1.7e-13 | intracellular | ||
| GO:0006886 | 5.2e-06 | intracellular protein transport | ||
| GO:0006913 | 5.2e-06 | nucleocytoplasmic transport | ||
| KEGG pathway | ||||
| InterPro domain | [8-170] IPR003579 | 1.8e-88 | Small GTPase superfamily, Rab type | |
| [9-167] IPR001806 | 3.3e-56 | Small GTPase superfamily | ||
| [8-162] IPR005225 | 2.5e-32 | Small GTP-binding protein domain | ||
| [5-170] IPR020849 | 4.8e-29 | Small GTPase superfamily, Ras type | ||
| [10-171] IPR003578 | 1.7e-13 | Small GTPase superfamily, Rho type | ||
| [13-198] IPR002041 | 5.2e-06 | Ran GTPase | ||
| Orthology group | MCL15913 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200572-TA
ATGGAGGATTATAAGTTTCTTTTTAAAGTCGTTTTAGTGGGCAACGCGGGTGTTGGTAAAACTTGTTTAGTGAGGAGATTTACTCAGGGCCTGTTTCCACCAGGTCAAGGTGCTACTATAGGCGTAGATTTTATGATTAAAACTGTCGAAGTGGATGGAGAGAAAGTTAAGCTTCAGATATGGGATACAGCGGGACAGGAGAGGTTCAGATCTATAACACAGAGTTACTACCGATCAGCCCACGCACTTATATTGGTATATGACATATCTTGCCAGCCCACATTTGACTGTCTTCCAGATTGGCTTCGAGAAATAGAAGAGTATGCCAACAATAAGGTTCTCAGAATATTAGTTGGTAATAAGACTGATAGGGAAGATAGGGAAATACCTCGTCATATAGGCGAAGACTTTGCACAGAGACATGGGATGTATTTTTTGGAAACATCCGCCAAAGAAGCTGAAAATGTTGAAAGATTGTTTATGGAAATTGCTGTTGAATTAATGGAGCAAGCAAAATGTAAGGAGCTACCCAAATATGATGGCAGTCTAGGTCCCATTAATGGTAAGACTTCCAGTGACAGTTCTTGTTGTCTCCGCTCATGA
>DPOGS200572-PA
MEDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDGEKVKLQIWDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYANNKVLRILVGNKTDREDREIPRHIGEDFAQRHGMYFLETSAKEAENVERLFMEIAVELMEQAKCKELPKYDGSLGPINGKTSSDSSCCLRS-