| DPOGS200591 | ||
|---|---|---|
| Transcript | DPOGS200591-TA | 669 bp |
| Protein | DPOGS200591-PA | 222 aa |
| Genomic position | DPSCF300076 - 677281-678247 | |
| RNAseq coverage | 462x (Rank: top 27%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL001031 | 2e-131 | 99.10% | |
| Bombyx | BGIBMGA011280-TA | 2e-126 | 94.59% | |
| Drosophila | Rab39-PA | 8e-103 | 76.58% | |
| EBI UniRef50 | UniRef50_F4X1S3 | 8e-111 | 85.59% | Ras-related protein Rab-39B n=10 Tax=Coelomata RepID=F4X1S3_ACREC |
| NCBI RefSeq | XP_623117.1 | 2e-111 | 85.14% | PREDICTED: similar to Rab39 CG12156-PA [Apis mellifera] |
| NCBI nr blastp | gi|229487390 | 3e-129 | 99.55% | unnamed protein product [Heliconius melpomene] |
| NCBI nr blastx | gi|229487390 | 9e-126 | 99.55% | unnamed protein product [Heliconius melpomene] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1.2e-86 | small GTPase mediated signal transduction | |
| GO:0005525 | 1.2e-86 | GTP binding | ||
| GO:0015031 | 1.2e-86 | protein transport | ||
| GO:0016020 | 2.3e-15 | membrane | ||
| GO:0007165 | 2.3e-15 | signal transduction | ||
| GO:0006184 | 2.3e-15 | GTP catabolic process | ||
| GO:0003924 | 2.3e-15 | GTPase activity | ||
| GO:0005622 | 2.4e-11 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [10-182] IPR003579 | 1.2e-86 | Small GTPase superfamily, Rab type | |
| [11-180] IPR001806 | 1.4e-52 | Small GTPase superfamily | ||
| [8-175] IPR005225 | 7.1e-28 | Small GTP-binding protein domain | ||
| [7-182] IPR020849 | 2.3e-15 | Small GTPase superfamily, Ras type | ||
| [12-182] IPR003578 | 2.4e-11 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL11582 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200591-TA
ATGGTAGACCCAATATTTGATTACCAGTTTAGGCTTATTTTAATCGGGGATAGCACAGTAGGCAAGAGTTCTTTGCTAAAATATTTTACAGATGGAAAATTCGCTGAGCTATCCGATCCAACTGTGGGGGTTGATTTTTTCGCTCGTATTATCGAAGTGCAGGATGGTACAAGAATTAAATTACAACTCTGGGACACGGCAGGACAAGAAAGGTTTAGGTCAATCACGAAATCCTATTACAGGAACTCAGTTGGTGCTCTTTTAGTTTACGACGTGTGTAATCGATCCAGTTTTGAACACATACCTTTATGGATGATGGAAGCGAAGAGGCATATAGAACCACACCGACCAGTGTTTGCATTGGTTGGATGTAAAGTTGACCTTGTTGGATCTGATAATAAGAATGGTGCAAGGAGAGAAGTATCCTGTGAGGAGGCCAGGATGTTTGCTGAAGAAAATGGACTTCATCACGTCGAGACATCAGCAAAAACGGGCCTGAATGTGGAACAAGCATTCATACTTGTGGCTCAGGAAGTGTATAATCGCATACAAACAGGTGAGTACAAAGTGGAGGACGGCTGGGATGGAATAAAGACAGGTTTTAACCGACCAAATGGTATGGACTTCAATCTACTCGAAGCAGAAACAGTTCAGTCCACCTGCTGCTAG
>DPOGS200591-PA
MVDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEVQDGTRIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVCNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKVDLVGSDNKNGARREVSCEEARMFAEENGLHHVETSAKTGLNVEQAFILVAQEVYNRIQTGEYKVEDGWDGIKTGFNRPNGMDFNLLEAETVQSTCC-