| DPOGS200601 | ||
|---|---|---|
| Transcript | DPOGS200601-TA | 495 bp |
| Protein | DPOGS200601-PA | 164 aa |
| Genomic position | DPSCF300076 - 510372-512161 | |
| RNAseq coverage | 1244x (Rank: top 10%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL001020 | 7e-91 | 96.93% | |
| Bombyx | BGIBMGA011317-TA | 1e-87 | 93.29% | |
| Drosophila | CG6359-PA | 1e-81 | 89.44% | |
| EBI UniRef50 | UniRef50_F1RDJ8 | 6e-71 | 78.88% | Sorting nexin 12 n=1 Tax=Danio rerio RepID=F1RDJ8_DANRE |
| NCBI RefSeq | XP_974293.1 | 1e-83 | 92.12% | PREDICTED: similar to sorting nexin [Tribolium castaneum] |
| NCBI nr blastp | gi|229487411 | 3e-88 | 96.93% | unnamed protein product [Heliconius melpomene] |
| NCBI nr blastx | gi|229487411 | 2e-86 | 96.93% | unnamed protein product [Heliconius melpomene] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 4e-32 | protein binding | |
| GO:0007154 | 4e-32 | cell communication | ||
| GO:0035091 | 4e-32 | phosphatidylinositol binding | ||
| KEGG pathway | ||||
| InterPro domain | [28-150] IPR001683 | 4e-32 | Phox homologous domain | |
| Orthology group | MCL14022 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200601-TA
ATGGCTGAAGATACGACAGCCGACGCAACCAGGCGGTTAAACGTTAAAAAACAAACTTTGGACGATGCTTACGCTGCCCCCGCGAACTTCTTAGAAATCGACGTGGTGAATCCAGTTACGATGGGAGTTGGAAAAAAACGCTTTACGGATTATGAAGTTCGCATGAGGACCAATCTCCCGGTGTTTAAAGTGAAAGAGTCTAGCGTCCGACGACGGTACAGCGACTTCGAATGGTTAAGAAATGAACTCGAAAGAGACAGTAAGATTGTAGTTCCGTCCTTGCCCGGCAAAGCATTAAAAAGACAACTCCCATTCAGAGGTGACGATGGCATATTTGAAGAGGAATTTATTGAAGATCGTAGAAAGGGTCTTGAAGTGTTTATAAACAAAATAGCTGGCCACCCGCTGGCCCAGAATGAGAGATGCCTGCATATGTTCCTACAGGAACCATCCATTGATAAGAATTATGTCCCCGGCAAGATTCGGAACCCATAA
>DPOGS200601-PA
MAEDTTADATRRLNVKKQTLDDAYAAPANFLEIDVVNPVTMGVGKKRFTDYEVRMRTNLPVFKVKESSVRRRYSDFEWLRNELERDSKIVVPSLPGKALKRQLPFRGDDGIFEEEFIEDRRKGLEVFINKIAGHPLAQNERCLHMFLQEPSIDKNYVPGKIRNP-