| DPOGS200617 | ||
|---|---|---|
| Transcript | DPOGS200617-TA | 525 bp |
| Protein | DPOGS200617-PA | 174 aa |
| Genomic position | DPSCF300076 + 19309-29773 | |
| RNAseq coverage | 1x (Rank: top 92%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014739 | 6e-30 | 100.00% | |
| Bombyx | BGIBMGA008905-TA | 1e-25 | 93.55% | |
| Drosophila | RunxB-PA | 1e-29 | 47.65% | |
| EBI UniRef50 | UniRef50_D6WXG4 | 3e-33 | 46.95% | Runt-like protein n=1 Tax=Tribolium castaneum RepID=D6WXG4_TRICA |
| NCBI RefSeq | XP_968913.1 | 6e-34 | 46.95% | PREDICTED: similar to CG15455 CG15455-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|194245232 | 7e-33 | 47.42% | RUNX3 [Aedes aegypti] |
| NCBI nr blastx | gi|194245232 | 6e-33 | 45.16% | RUNX3 [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 8.4e-28 | nucleus | |
| GO:0003677 | 8.4e-28 | DNA binding | ||
| GO:0005524 | 8.4e-28 | ATP binding | ||
| GO:0006355 | 8.4e-28 | regulation of transcription, DNA-dependent | ||
| GO:0003700 | 3.2e-17 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [80-116] IPR000040 | 8.4e-28 | Acute myeloid leukemia 1 protein (AML 1)/Runt | |
| [80-119] IPR012346 | 3.2e-17 | p53/RUNT-type transcription factor, DNA-binding domain | ||
| [80-118] IPR013524 | 1.5e-16 | Acute myeloid leukemia 1 (AML 1)/Runt | ||
| [80-115] IPR008967 | 3e-14 | p53-like transcription factor, DNA-binding | ||
| Orthology group | MCL25549 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200617-TA
ATGCATTTATCGAGTGAAGTGAGTTCTACAACCAATGGTTTGGGGCACGAGGCGCCGTCGTCTAGCTATGGTAACGCTCTGCCTAGCCAGCCTTTGACTGCTGAACTCCTGGCTGAGCGTACCCTTGAAGGTCTACTCGCTGATCATCCTGGTGAACTAGTTAAAACCGGTAGCCCGCATGTGGATATGCCCCTCGGCCAATCCGCTAATGTCCCTAAAGCGAATCTGCCCGCATTAGGTAAATCTTTCACGCTAACCATAATGTTGGCGACATCTCCGCCACAGGTGGCGACGTATCAGAAGGCTATCAAGGTAACTGTGGACGGACCTCGTGAGCCAAGATCCAAGACTCGTCATCACGGCTTTCATCCGTTTCACTTTGGACCACGCTTCGCACCCGACCCGCTAATGGGATCTCTACCTTTCAAATTATCAGGCCCGGAAGCCCGGGATTGTGGGGGGGAAGGGGGAAGAAAGAGTAGGGGCATAACCCTTCCGCTACCGCGCGACAATGCGGGTGCATAA
>DPOGS200617-PA
MHLSSEVSSTTNGLGHEAPSSSYGNALPSQPLTAELLAERTLEGLLADHPGELVKTGSPHVDMPLGQSANVPKANLPALGKSFTLTIMLATSPPQVATYQKAIKVTVDGPREPRSKTRHHGFHPFHFGPRFAPDPLMGSLPFKLSGPEARDCGGEGGRKSRGITLPLPRDNAGA-