DPOGS200646 | ||
---|---|---|
Transcript | DPOGS200646-TA | 351 bp |
Protein | DPOGS200646-PA | 116 aa |
Genomic position | DPSCF300076 + 669453-669882 | |
RNAseq coverage | 1551x (Rank: top 8%) |
Annotation | ||||
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Heliconius | HMEL001034 | 5e-50 | 73.28% |   |
Bombyx | BGIBMGA011323-TA | 7e-44 | 67.24% |   |
Drosophila | CG12859-PA | 3e-19 | 36.04% |   |
EBI UniRef50 | UniRef50_C3PPG4 | 1e-47 | 73.28% | Similar to CG12859 n=2 Tax=Nymphalidae RepID=C3PPG4_9NEOP |
NCBI RefSeq | XP_001950282.1 | 9e-19 | 41.90% | PREDICTED: similar to CG12859 [Acyrthosiphon pisum] |
NCBI nr blastp | gi|229487387 | 4e-47 | 73.28% | unnamed protein product [Heliconius melpomene] |
NCBI nr blastx | gi|229487387 | 2e-45 | 73.28% | unnamed protein product [Heliconius melpomene] |
Group | ||||
---|---|---|---|---|
KEGG pathway | api:100165200 | 3e-18 |   | |
  | K03960 (NDUFB4) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
Orthology group | MCL17014 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200646-TA
ATGGCTGAGAAATATGGAATATCTGAAAACAAATTTAAACTCATACAAATGCAAGCCGAAAGGCGTGCGGAGTTGAGGAAAGAGTTTCTAAAACAGAGAACCAATCCATGGAAAAATGCTTCAGAGGCGGGCTATGTTTTCGACTCGGCCCATCAGAGATTCATATCCATGAAAGTGACTCAACTCGACCATTTTCAACCCAATAAGAGGACTGCTCTGTTCGGATTCTTTACCATAATAGTCCCAATGTTTTCATACGGATATTTAATCAAGAAACACCGCGACAATAGGGAACGCCAGATCAGATCGGGAGAACTGCGTTACAGGGAGAGGGAGTTCAAACTTTGCTAA
>DPOGS200646-PA
MAEKYGISENKFKLIQMQAERRAELRKEFLKQRTNPWKNASEAGYVFDSAHQRFISMKVTQLDHFQPNKRTALFGFFTIIVPMFSYGYLIKKHRDNRERQIRSGELRYREREFKLC-