Monarch geneset OGS2.0

DPOGS200701
TranscriptDPOGS200701-TA780 bp
ProteinDPOGS200701-PA259 aa
Genomic positionDPSCF300274 - 171522-173875
RNAseq coverage1x (Rank: top 92%)
Annotation
HeliconiusHMEL0118961e-112100.00% 
BombyxBGIBMGA005282-TA6e-74100.00% 
DrosophilaSpx-PA2e-10390.16% 
EBI UniRef50UniRef50_UPI000194DCF39e-10087.05%UPI000194DCF3 related cluster n=1 Tax=unknown RepID=UPI000194DCF3
NCBI RefSeqNP_001037646.11e-11099.48%spliceosomal protein on the X [Bombyx mori]
NCBI nr blastpgi|1129833283e-10999.48%spliceosomal protein on the X [Bombyx mori]
NCBI nr blastxgi|1129833288e-12569.88%spliceosomal protein on the X [Bombyx mori]
Group
Gene OntologyGO:00001662.8e-29nucleotide binding
GO:00036766.2e-24nucleic acid binding
KEGG pathwayame:4104347e-106 
 K12831 (SF3B4, SAP49)maps-> Spliceosome
InterPro domain[8-89] IPR0126772.8e-29Nucleotide-binding, alpha-beta plait
[14-87] IPR0005046.2e-24RNA recognition motif domain
Orthology group 
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200701-TA
ATGGCTGCAGGACCAATTGCAGAAAGAAATCAAGATGCAACGATTTACGTTGGTGGTTTGGACGACAGAGTCACAGAAAGCCTGCTTTGGGAACTATTTGTTCAAGCTGGACCTGTCGTGAATGTTCATATGCCAAAGGACCGAGTGACACAAACTCATCAAGGATATGGATTTGTTGAATTTATGGGAGAAGAAGATGCCGATTATGCAATAAAGGTCATGAATATGATAAAACTATATGGAAAGCCCGTAAGGGTAAATAAAGCGTCTGCACACCAGAAGAACCTTGATGTGGGAGCTAATGTGTTCATTGGTAATCTTGATCCCGAGGTAGATGAAAAACTATTGTATGATACATTCTCTGCATTCGGTGTCATATTGCAGACACCTAAGGTTATGAGAGACCCCGAGACTGGTAACTCAAAAGCATTTGCATTTATAAACTTTGCATCCTTCGAAGCCTCCGATGCGGCCATAGAGGCTATGAATAACCAGTACTTGTGCAACCGTCCTATATCTGTCTCTTATGCATTTAAGAAAGATGTTAAGGGAGAAAGGCATGGTTCCGCAGCTGAAAGACAATCAACAATAATTTCTTCATTTCATCATTTCCCCCCTCCTCCATTTGGGCCCCCTGGCTTTGGCCCACCACCCCCTCCTGGAGCGAGGCCCCCACCATGGAGGCCACCTCCACCGTCTTTCAGGCCCCAATACCGACCGCCACCGTTTGGTCATCCCCCCTTCCCGCACCACCCGCCTGAACCAAACTATAACTATTAA

Protein sequence:

>DPOGS200701-PA
MAAGPIAERNQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGERHGSAAERQSTIISSFHHFPPPPFGPPGFGPPPPPGARPPPWRPPPPSFRPQYRPPPFGHPPFPHHPPEPNYNY-