Monarch geneset OGS2.0

DPOGS200778
TranscriptDPOGS200778-TA819 bp
ProteinDPOGS200778-PA272 aa
Genomic positionDPSCF300370 - 81193-83286
RNAseq coverage200x (Rank: top 47%)
Annotation
HeliconiusHMEL0225461e-9163.74% 
BombyxBGIBMGA011987-TA1e-10064.44% 
DrosophilaRluA-1-PB3e-1027.57% 
EBI UniRef50UniRef50_E9HPA18e-5547.41%Putative uncharacterized protein n=2 Tax=Daphnia pulex RepID=E9HPA1_DAPPU
NCBI RefSeqXP_001652796.17e-5243.35%hypothetical protein AaeL_AAEL007487 [Aedes aegypti]
NCBI nr blastpgi|3214553063e-5447.41%hypothetical protein DAPPUDRAFT_332203 [Daphnia pulex]
NCBI nr blastxgi|3214553061e-5347.41%hypothetical protein DAPPUDRAFT_332203 [Daphnia pulex]
Group
Gene OntologyGO:00037233.7e-40RNA binding
GO:00094513.7e-40RNA modification
GO:00099823.7e-40pseudouridine synthase activity
GO:00015223.7e-40pseudouridine synthesis
KEGG pathway 
InterPro domain[6-207] IPR0201033.7e-40Pseudouridine synthase, catalytic domain
[11-174] IPR0061454.3e-29Pseudouridine synthase, RsuA and RluB/C/D/E/F
Orthology groupMCL16362 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200778-TA
ATGGCTGTGGAGAAGTTATATGAGAGTGATGATTTCCTCATAGTGAATAAACCATACGATATGTATATTAATTCTGACGATGAAAACGAGAAGAACACCTTGGTATGTCAAATAGCTAGCCACGATTCACATTTATCAACATCGTCTAACCCGCTTCATTTCGTCCAACGTCTCGACTACGCCACTAGTGGTGTTATTTGCATCGCCAAGACCAAAACAGCGGCAGCCCAAGCGGGGAAATTGTTTGAGAAGAGATTGACTAAAAAATATTATGTTGCGGTCGTAAGGAAACATTTAAAGTTTGAGTTAGCGGACATAAAGTATCCCATAGGCGTGGATCTGTCGCCAGAGAACAGTCACAAGATGGCGACGCAGACTGCTGATACAACTTGCGGCTCTCCAAGAGAGGCTCTCACTCGTGTCCTCTTGTTGGAGACAGGGTTTTACGGTTCGGATCCTGTTAGTGTTGTGCTGCTGAAACCGATCACTGGTCGCCGGCATCAGCTCCGTGTGCATTGTCTCTCCATCGGCCACACTCTACTCGGAGACTACACGTACAGCGCTCCGGTGGACACTGTGCCGCATAGAATGTTTTTACACGCGACCAGACTGGTACTACCACTCCAAAAACAACCGCTCGATGTTCAGACTCTCATTCCGTTCTTCAGCGATCCACAGTTCACCAGCAAGTGGAAGACCTGTAAAGTATATTATAAATACAGAACTAGAGAGGACTTTACAGCCGCCTGTGACGTCATCGACAGGAGTTATACGGTTGGTATAAAATATGACGAGTACAGTGCTAACAAGAAGTTATGA

Protein sequence:

>DPOGS200778-PA
MAVEKLYESDDFLIVNKPYDMYINSDDENEKNTLVCQIASHDSHLSTSSNPLHFVQRLDYATSGVICIAKTKTAAAQAGKLFEKRLTKKYYVAVVRKHLKFELADIKYPIGVDLSPENSHKMATQTADTTCGSPREALTRVLLLETGFYGSDPVSVVLLKPITGRRHQLRVHCLSIGHTLLGDYTYSAPVDTVPHRMFLHATRLVLPLQKQPLDVQTLIPFFSDPQFTSKWKTCKVYYKYRTREDFTAACDVIDRSYTVGIKYDEYSANKKL-