Monarch geneset OGS2.0

DPOGS200811
TranscriptDPOGS200811-TA714 bp
ProteinDPOGS200811-PA237 aa
Genomic positionDPSCF300249 - 2448-8315
RNAseq coverage51x (Rank: top 70%)
Annotation
HeliconiusHMEL0119191e-10078.09% 
BombyxBGIBMGA005390-TA4e-9476.96% 
Drosophilah-PB1e-3946.73% 
EBI UniRef50UniRef50_Q8T3063e-5454.32%Helix-loop-helix transcription factor n=1 Tax=Tribolium castaneum RepID=Q8T306_TRICA
NCBI RefSeqNP_001107765.16e-5554.32%hairy [Tribolium castaneum]
NCBI nr blastpgi|2700141449e-5454.32%hypothetical protein TcasGA2_TC012851 [Tribolium castaneum]
NCBI nr blastxgi|2700141444e-5353.88%hypothetical protein TcasGA2_TC012851 [Tribolium castaneum]
Group
Gene OntologyGO:00063557.9e-15regulation of transcription, DNA-dependent
GO:00056344.7e-14nucleus
GO:00036778.5e-12DNA binding
KEGG pathway 
InterPro domain[20-76] IPR0010927.9e-15Helix-loop-helix DNA-binding domain
[18-78] IPR0115984.7e-14Helix-loop-helix DNA-binding
[85-121] IPR0036508.5e-12Orange
[85-125] IPR0183522.3e-08Orange subgroup
Orthology groupMCL14639 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200811-TA
ATGGTGACTGTAGCGAGCCCGCATACAGACATGCAGGAGGCGAAGAAGACAGATAACAGACGGAGTAACAAGCCTATTATGGAGAAGAGAAGACGAGCGCGTATTAACAACTGCTTGAATGAATTGAAGGCATTAATACTTGATGCAATGAAAAAAGACCCGGCGCGACATTCAAAATTAGAGAAGGCAGATATTTTGGAGATGACTGTCAAACATTTGGAGGGTCTGCGATCTGAAGGCGCCGGTTCCCCCGACCGCTTCAAGGCTGGTTATAGACATTGTTTGTCTGAAGTGTCCAAGTTCCCCGGCCTGGATACAGGTTTGAAGCGCCGCCTCGTGAAGCATTTGGAGGGTTGTGTCAACGTGAACAGACCGCTCACAGCGCCGACCCCGCCATCAGACGTCGATGATACATCACACTCTACAATATTCATATCAGCTGGACCGGGTTCTGGGGTGCGATTGGTGCCAACGAGATTATCTAATGGGGATATCGCTTTGGTTCTACCAGCTGGAGTGAGCGCTAGTACGCTGGCAGCTGTTCCGACGTTACTACCGCTATCACCTCGCGAGGTATCCTCTGCGTCATCGGAGCCTCGATGTTTGTCACCCGCCAGTTCTGGTTGGGGCAGCCCTCCGCCATCGGAGGAACAAGCGCCTCTCGCGTTGGTCACCAGAAGACAGCCAGAGGAGAAACCGTGGCGTCCGTGGTGA

Protein sequence:

>DPOGS200811-PA
MVTVASPHTDMQEAKKTDNRRSNKPIMEKRRRARINNCLNELKALILDAMKKDPARHSKLEKADILEMTVKHLEGLRSEGAGSPDRFKAGYRHCLSEVSKFPGLDTGLKRRLVKHLEGCVNVNRPLTAPTPPSDVDDTSHSTIFISAGPGSGVRLVPTRLSNGDIALVLPAGVSASTLAAVPTLLPLSPREVSSASSEPRCLSPASSGWGSPPPSEEQAPLALVTRRQPEEKPWRPW-